C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mediator complex subunit 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002679 Med6 10090 - 12:81573557-81595008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002756 Med6-201 81573565-81594958 protein_coding
  ENSMUST00000159187 Med6-003 81581678-81595008 retained_intron
  ENSMUST00000160739 Med6-005 81573696-81574746 retained_intron
  ENSMUST00000161211 Med6-001 81573557-81595006 protein_coding
  ENSMUST00000161598 Med6-004 81573560-81594963 protein_coding
  ENSMUST00000161902 Med6-002 81579603-81593949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002756ENSMUST00000159187ENSMUST00000160739ENSMUST00000161211ENSMUST00000161598ENSMUST00000161902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002756 1.885±0.69 0.466±0.08 8.744±0.33 6.618±1.36 N/A 1.871±0.32 1.360±0.27 N/A 10.190±5.38 N/A 3.548±0.84 11.010±6.70 24.777±5.98 N/A
ENSMUST00000159187 3.429±0.52 1.372±0.58 N/A N/A 1.899±1.05 1.711±0.59 1.330±0.25 1.329±0.00 3.201±2.34 2.020±0.61 N/A 3.366±1.51 N/A 2.145±0.00
ENSMUST00000160739 N/A N/A N/A 7.703±0.00 N/A 2.803±0.57 N/A N/A 2.136±0.43 N/A N/A 8.659±5.84 19.902±0.51 4.556±0.00
ENSMUST00000161211 2.127±0.07 N/A 6.508±1.72 8.167±3.88 0.944±0.00 1.448±0.00 1.989±0.63 3.679±0.59 8.137±5.33 2.767±0.86 1.426±1.00 2.210±1.74 14.160±10.78 4.909±0.64
ENSMUST00000161598 0.914±0.00 0.752±0.02 N/A N/A 2.047±0.90 1.218±0.37 N/A N/A 1.573±0.36 N/A N/A 1.247±0.00 N/A N/A
ENSMUST00000161902 1.932±0.44 1.315±0.67 N/A N/A 2.135±1.77 1.512±0.44 1.301±0.00 2.088±0.09 N/A 1.246±0.00 1.662±0.42 2.983±2.00 7.878±0.00 1.936±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WZ CIL_0002WZ_0003 CGP 12:81573557-81664941

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034734 med6 mediator complex subunit 6 protein_coding Danio_rerio
ENSG00000133997 MED6 mediator complex subunit 6 protein_coding Homo_sapiens

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