C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flightless I homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002889 Flii-001 ENSMUSG00000002812 10090 - 11:60714143-60727263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002889 50.158±0.67 47.745±2.44 48.243±0.31 27.076±7.72 49.330±8.17 65.531±8.11 30.976±6.27 31.484±3.81 14.849±1.40 54.624±7.89 20.536±2.16 56.378±12.88 33.841±8.19 7.544±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E2 CIL_0000E2_0002 CGP 11:60536381-60714186
CIL_0005J2 CIL_0005J2_0002 CGP 11:60699723-60727263
CIL_0000E4 CIL_0000E4_0002 CGP 11:60714123-60732951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005815 IEA microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IMP multicellular organismal development
GO:0030036 TAS actin cytoskeleton organization
GO:0030054 IEA cell junction
GO:0051014 TAS actin filament severing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155969 flii-001 protein_coding Danio_rerio 0 571
ENSDART00000083263 flii-201 protein_coding Danio_rerio 0 562
ENST00000316843 LLGL1-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000327031 FLII-001 protein_coding Homo_sapiens 0 4621
ENST00000459958 FLII-008 retained_intron Homo_sapiens 0 675
ENST00000461110 FLII-023 retained_intron Homo_sapiens 0 545
ENST00000478416 FLII-004 retained_intron Homo_sapiens 0 856
ENST00000479155 LLGL1-002 retained_intron Homo_sapiens 0.000000004 69
ENST00000488221 FLII-006 retained_intron Homo_sapiens 0 730
ENST00000488932 FLII-032 protein_coding Homo_sapiens 0 854
ENST00000496727 FLII-007 retained_intron Homo_sapiens 0 451
ENST00000545457 FLII-019 protein_coding Homo_sapiens 0 3882
ENST00000577398 FLII-030 protein_coding Homo_sapiens 0.0000000006 69
ENST00000577626 FLII-027 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000578101 FLII-017 nonsense_mediated_decay Homo_sapiens 0 4510
ENST00000578558 FLII-026 protein_coding Homo_sapiens 0 2394
ENST00000579294 FLII-018 protein_coding Homo_sapiens 0 4506
ENST00000580453 FLII-035 retained_intron Homo_sapiens 0 717
ENST00000580966 FLII-029 retained_intron Homo_sapiens 0 394
ENST00000581401 FLII-025 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000581858 FLII-034 nonsense_mediated_decay Homo_sapiens 0.0000000004 69
ENST00000582626 FLII-020 retained_intron Homo_sapiens 0 250
ENST00000584444 FLII-022 processed_transcript Homo_sapiens 0 854

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