C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177731-ENSG00000177427 CGP 9606 17:18244836-18266552
GeneTranscriptPositionBiotype
ENSG00000131899 (LLGL1)
lethal giant larvae homolog 1 (Drosophila) 		ENST00000316843 (LLGL1-001) 18225587-18244875 protein_coding
ENST00000479155 (LLGL1-002) 18233902-18244875 retained_intron
ENST00000621229 (LLGL1-201) 18225677-18242823 protein_coding
ENSG00000177427 (MIEF2)
mitochondrial elongation factor 2 		ENST00000323019 (MIEF2-001) 18260534-18266552 protein_coding
ENST00000395703 (MIEF2-004) 18260604-18263515 protein_coding
ENST00000395704 (MIEF2-002) 18260597-18266204 protein_coding
ENST00000395706 (MIEF2-003) 18261110-18265781 protein_coding
ENST00000577216 (MIEF2-007) 18260616-18264127 processed_transcript
ENST00000578174 (MIEF2-005) 18260597-18263546 protein_coding
ENST00000578621 (MIEF2-006) 18260645-18263802 protein_coding
ENST00000579341 (MIEF2-011) 18260661-18263881 protein_coding
ENST00000583745 (MIEF2-008) 18260662-18263181 retained_intron
ENSG00000177731 (FLII)
flightless I homolog (Drosophila) 		ENST00000327031 (FLII-001) 18244836-18258916 protein_coding
ENST00000459958 (FLII-008) 18246545-18247436 retained_intron
ENST00000461110 (FLII-023) 18252115-18254638 retained_intron
ENST00000465046 (FLII-016) 18245229-18246008 retained_intron
ENST00000473425 (FLII-021) 18254791-18257276 protein_coding
ENST00000474265 (FLII-012) 18245238-18246314 retained_intron
ENST00000478416 (FLII-004) 18253887-18258697 retained_intron
ENST00000487369 (FLII-010) 18245238-18246006 retained_intron
ENST00000487693 (FLII-014) 18245230-18246215 retained_intron
ENST00000488221 (FLII-006) 18251387-18253698 retained_intron
ENST00000488932 (FLII-032) 18252056-18255221 protein_coding
ENST00000493401 (FLII-013) 18245354-18246222 retained_intron
ENST00000493600 (FLII-009) 18245230-18246200 retained_intron
ENST00000496727 (FLII-007) 18249127-18251471 retained_intron
ENST00000545457 (FLII-019) 18244841-18258723 protein_coding
ENST00000577398 (FLII-030) 18244836-18246062 protein_coding
ENST00000577402 (FLII-033) 18247176-18248759 retained_intron
ENST00000577485 (FLII-024) 18245351-18254651 protein_coding
ENST00000577626 (FLII-027) 18252493-18254630 nonsense_mediated_decay
ENST00000578101 (FLII-017) 18244922-18258705 nonsense_mediated_decay
ENST00000578558 (FLII-026) 18244836-18258726 protein_coding
ENST00000579294 (FLII-018) 18245059-18258556 protein_coding
ENST00000580453 (FLII-035) 18246153-18247125 retained_intron
ENST00000580966 (FLII-029) 18246111-18246755 retained_intron
ENST00000581349 (FLII-028) 18254604-18257276 protein_coding
ENST00000581401 (FLII-025) 18253427-18254597 nonsense_mediated_decay
ENST00000581858 (FLII-034) 18244836-18245968 nonsense_mediated_decay
ENST00000582626 (FLII-020) 18256525-18258705 retained_intron
ENST00000584444 (FLII-022) 18253357-18258691 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0000E4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002812-ENSMUSG00000018599 CGP 10090 11:60714123-60732951
GeneTranscriptPositionBiotype
ENSMUSG00000002812 (Flii)
flightless I homolog (Drosophila) 		ENSMUST00000002889 (Flii-001) 60714143-60727263 protein_coding
ENSMUST00000137226 (Flii-002) 60724365-60727223 retained_intron
ENSMUST00000154141 (Flii-004) 60714123-60714721 retained_intron
ENSMUST00000154465 (Flii-003) 60719227-60720141 retained_intron
ENSMUSG00000018599 (Mief2)
mitochondrial elongation factor 2 		ENSMUST00000018743 (Mief2-001) 60728398-60732951 protein_coding
ENSMUST00000146159 (Mief2-002) 60728445-60730663 processed_transcript
ENSMUST00000154890 (Mief2-003) 60728443-60730996 retained_intron
ENSMUSG00000020536 (Llgl1)
lethal giant larvae homolog 1 (Drosophila) 		ENSMUST00000052346 (Llgl1-001) 60699723-60714186 protein_coding
ENSMUST00000108719 (Llgl1-002) 60699845-60714186 protein_coding
ENSMUST00000128749 (Llgl1-003) 60704197-60706069 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E4_0001ENSG00000131899ENST00000316843ENST00000621229ENSG00000177427ENST00000323019ENST00000395704ENST00000395706ENST00000578174ENST00000578621ENST00000579341ENSG00000177731ENST00000327031ENST00000459958ENST00000545457ENST00000577398ENST00000578101ENST00000579294ENST00000580453ENST00000584444CIL_0000E4_0002ENSMUSG00000002812ENSMUST00000002889ENSMUSG00000018599ENSMUST00000018743ENSMUST00000154890ENSMUSG00000020536ENSMUST00000052346ENSMUST00000108719
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131899 ENST00000316843 N/A N/A N/A 11.492±8.32 N/A N/A N/A N/A N/A N/A N/A 14.229±1.15 8.083±0.01 N/A
ENST00000479155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621229 N/A N/A N/A 18.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177427 ENST00000323019 N/A 0.583±0.00 N/A 0.467±0.00 N/A N/A 0.779±0.00 1.160±0.00 0.362±0.00 N/A 1.059±0.26 1.640±0.34 1.669±0.13 0.725±0.08
ENST00000395703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395704 0.510±0.00 0.712±0.00 0.703±0.00 0.564±0.00 0.688±0.00 0.271±0.08 0.304±0.00 N/A N/A 0.150±0.00 N/A N/A 0.553±0.00 N/A
ENST00000395706 1.690±0.00 0.943±0.00 0.351±0.00 4.467±0.00 1.397±1.11 1.176±0.21 1.632±1.24 3.510±2.97 0.669±0.07 1.445±0.44 2.355±1.56 3.434±2.57 2.915±0.83 1.723±0.56
ENST00000577216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578174 N/A N/A N/A N/A N/A N/A 1.021±0.00 N/A 1.482±0.00 N/A N/A N/A N/A N/A
ENST00000578621 N/A N/A N/A 2.482±0.00 1.701±0.00 2.282±0.00 N/A N/A N/A N/A 3.574±0.00 N/A N/A N/A
ENST00000579341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.345±0.97 N/A N/A
ENST00000583745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177731 ENST00000327031 N/A N/A N/A 7.079±0.00 N/A N/A 15.482±0.00 N/A 4.499±2.36 17.640±0.00 119.918±0.00 23.762±11.24 23.661±4.68 N/A
ENST00000459958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.159±0.00 59.498±0.00 76.936±0.00
ENST00000461110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545457 14.575±0.00 22.044±0.00 N/A 1.901±0.00 23.570±0.00 12.875±11.41 17.067±0.00 15.899±0.00 3.103±1.30 10.030±7.99 111.566±0.00 12.414±3.94 12.502±0.83 16.399±1.40
ENST00000577398 N/A N/A N/A N/A N/A N/A N/A N/A 13.371±0.00 45.473±0.00 N/A N/A N/A N/A
ENST00000577402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578101 N/A N/A N/A 2.061±0.00 N/A 2.204±0.00 N/A 5.623±0.00 N/A 2.174±0.00 7.668±0.00 2.281±0.00 N/A N/A
ENST00000578558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579294 31.110±0.00 30.246±0.00 2.220±0.00 N/A 17.035±13.06 13.023±7.74 6.542±4.10 9.882±0.00 2.063±0.00 2.794±0.00 55.325±0.00 9.696±7.79 23.580±0.00 31.257±4.28
ENST00000580453 N/A N/A N/A N/A N/A N/A N/A 52.192±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584444 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.297±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002812 ENSMUST00000002889 50.158±0.67 47.745±2.44 48.243±0.31 27.076±7.72 49.330±8.17 65.531±8.11 30.976±6.27 31.484±3.81 14.849±1.40 54.624±7.89 20.536±2.16 56.378±12.88 33.841±8.19 7.544±1.02
ENSMUST00000137226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018599 ENSMUST00000018743 6.443±1.78 16.402±1.39 5.365±0.26 3.803±1.93 8.395±3.02 5.140±0.93 10.561±0.85 5.196±0.76 4.367±3.38 7.004±0.86 29.267±3.85 7.305±3.22 3.125±1.18 1.712±0.79
ENSMUST00000146159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154890 N/A 11.784±0.55 3.587±0.00 3.516±0.51 5.454±0.01 4.085±0.64 6.585±0.00 N/A 2.044±2.04 N/A N/A 5.960±0.97 N/A 1.161±0.00
ENSMUSG00000020536 ENSMUST00000052346 14.988±0.68 18.713±4.93 N/A 12.352±5.10 12.584±2.77 10.643±1.69 N/A 4.729±0.18 3.786±1.01 11.391±3.17 N/A 22.781±4.91 N/A 2.010±0.55
ENSMUST00000108719 16.315±2.29 13.903±3.83 12.636±0.27 29.309±18.60 18.151±0.83 16.759±2.63 7.364±1.11 9.162±2.00 5.418±2.03 18.537±0.79 3.594±0.42 31.371±11.10 8.648±2.07 4.547±0.35
ENSMUST00000128749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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