C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lethal giant larvae homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316843 LLGL1-001 ENSG00000131899 9606 + 17:18225587-18244875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENST00000316843
Transcript ID Brain Ovary Placenta
ENST00000316843 11.492±8.32 14.229±1.15 8.083±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E2 CIL_0000E2_0001 CGP 17:18183078-18244875
CIL_0005J2 CIL_0005J2_0001 CGP 17:18225587-18258916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000137 ISS Golgi cis cisterna
GO:0005097 ISS Rab GTPase activator activity
GO:0005198 TAS structural molecule activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 TAS cytoskeleton
GO:0006461 IDA protein complex assembly
GO:0006887 IEA exocytosis
GO:0006893 ISS Golgi to plasma membrane transport
GO:0007409 ISS axonogenesis
GO:0019901 IDA protein kinase binding
GO:0030424 ISS axon
GO:0030864 IDA cortical actin cytoskeleton
GO:0030866 IDA cortical actin cytoskeleton organization
GO:0031901 ISS early endosome membrane
GO:0032588 ISS trans-Golgi network membrane
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0035090 IEA maintenance of apical/basal cell polarity
GO:0035748 IEA myelin sheath abaxonal region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052346 Llgl1-001 protein_coding Mus_musculus 0 3258
ENSMUST00000108719 Llgl1-002 protein_coding Mus_musculus 0 3216
ENSMUST00000154141 Flii-004 retained_intron Mus_musculus 5e-17 95
ENSMUST00000002889 Flii-001 protein_coding Mus_musculus 0.000000003 69

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