C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000E2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091542-ENSG00000131899 CGP 9606 17:18183078-18244875
GeneTranscriptPositionBiotype
ENSG00000091542 (ALKBH5)
AlkB family member 5, RNA demethylase 		ENST00000399138 (ALKBH5-001) 18184239-18209954 protein_coding
ENST00000490106 (ALKBH5-002) 18206561-18209954 retained_intron
ENST00000541285 (ALKBH5-003) 18183078-18209398 protein_coding
ENSG00000131899 (LLGL1)
lethal giant larvae homolog 1 (Drosophila) 		ENST00000316843 (LLGL1-001) 18225587-18244875 protein_coding
ENST00000479155 (LLGL1-002) 18233902-18244875 retained_intron
ENST00000621229 (LLGL1-201) 18225677-18242823 protein_coding
ENSG00000177731 (FLII)
flightless I homolog (Drosophila) 		ENST00000327031 (FLII-001) 18244836-18258916 protein_coding
ENST00000459958 (FLII-008) 18246545-18247436 retained_intron
ENST00000461110 (FLII-023) 18252115-18254638 retained_intron
ENST00000465046 (FLII-016) 18245229-18246008 retained_intron
ENST00000473425 (FLII-021) 18254791-18257276 protein_coding
ENST00000474265 (FLII-012) 18245238-18246314 retained_intron
ENST00000478416 (FLII-004) 18253887-18258697 retained_intron
ENST00000487369 (FLII-010) 18245238-18246006 retained_intron
ENST00000487693 (FLII-014) 18245230-18246215 retained_intron
ENST00000488221 (FLII-006) 18251387-18253698 retained_intron
ENST00000488932 (FLII-032) 18252056-18255221 protein_coding
ENST00000493401 (FLII-013) 18245354-18246222 retained_intron
ENST00000493600 (FLII-009) 18245230-18246200 retained_intron
ENST00000496727 (FLII-007) 18249127-18251471 retained_intron
ENST00000545457 (FLII-019) 18244841-18258723 protein_coding
ENST00000577398 (FLII-030) 18244836-18246062 protein_coding
ENST00000577402 (FLII-033) 18247176-18248759 retained_intron
ENST00000577485 (FLII-024) 18245351-18254651 protein_coding
ENST00000577626 (FLII-027) 18252493-18254630 nonsense_mediated_decay
ENST00000578101 (FLII-017) 18244922-18258705 nonsense_mediated_decay
ENST00000578558 (FLII-026) 18244836-18258726 protein_coding
ENST00000579294 (FLII-018) 18245059-18258556 protein_coding
ENST00000580453 (FLII-035) 18246153-18247125 retained_intron
ENST00000580966 (FLII-029) 18246111-18246755 retained_intron
ENST00000581349 (FLII-028) 18254604-18257276 protein_coding
ENST00000581401 (FLII-025) 18253427-18254597 nonsense_mediated_decay
ENST00000581858 (FLII-034) 18244836-18245968 nonsense_mediated_decay
ENST00000582626 (FLII-020) 18256525-18258705 retained_intron
ENST00000584444 (FLII-022) 18253357-18258691 processed_transcript
CIL_0000E2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042650-ENSMUSG00000020536 CGP 10090 11:60536381-60714186
GeneTranscriptPositionBiotype
ENSMUSG00000002812 (Flii)
flightless I homolog (Drosophila) 		ENSMUST00000002889 (Flii-001) 60714143-60727263 protein_coding
ENSMUST00000137226 (Flii-002) 60724365-60727223 retained_intron
ENSMUST00000154141 (Flii-004) 60714123-60714721 retained_intron
ENSMUST00000154465 (Flii-003) 60719227-60720141 retained_intron
ENSMUSG00000020536 (Llgl1)
lethal giant larvae homolog 1 (Drosophila) 		ENSMUST00000052346 (Llgl1-001) 60699723-60714186 protein_coding
ENSMUST00000108719 (Llgl1-002) 60699845-60714186 protein_coding
ENSMUST00000128749 (Llgl1-003) 60704197-60706069 retained_intron
ENSMUSG00000042650 (Alkbh5)
alkB, alkylation repair homolog 5 (E. coli) 		ENSMUST00000044250 (Alkbh5-001) 60537978-60558512 protein_coding
ENSMUST00000134770 (Alkbh5-002) 60536381-60554367 processed_transcript
ENSMUSG00000084034 (Gm12617)
predicted gene 12617 		ENSMUST00000121268 (Gm12617-001) 60692695-60693075 processed_pseudogene
ENSMUSG00000084273 (Gm12628)
predicted gene 12628 		ENSMUST00000122193 (Gm12628-001) 60571623-60572210 unprocessed_pseudogene
ENSMUSG00000084335 (Gm12619)
predicted gene 12619 		ENSMUST00000117369 (Gm12619-001) 60651070-60657857 unprocessed_pseudogene
ENSMUSG00000093924 (Gm12623)
predicted gene 12623 		ENSMUST00000119849 (Gm12623-001) 60573567-60575549 processed_pseudogene
ENSMUSG00000093978 (Gm12612)
predicted gene 12612 		ENSMUST00000140182 (Gm12612-001) 60669140-60671125 processed_pseudogene
ENSMUSG00000094005 (Gm12625)
predicted gene 12625 		ENSMUST00000179122 (Gm12625-001) 60641861-60642242 unprocessed_pseudogene
ENSMUSG00000094278 (Gm12626)
predicted gene 12626 		ENSMUST00000117339 (Gm12626-001) 60631047-60633029 processed_pseudogene
ENSMUSG00000094566 (Gm12620)
predicted gene 12620 		ENSMUST00000119791 (Gm12620-001) 60682179-60684164 processed_pseudogene
ENSMUSG00000095136 (Gm12616)
predicted gene 12616 		ENSMUST00000118594 (Gm12616-001) 60679707-60680088 unprocessed_pseudogene
ENSMUSG00000095291 (Gm12613)
predicted gene 12613 		ENSMUST00000180323 (Gm12613-001) 60610136-60610517 unprocessed_pseudogene
ENSMUSG00000095605 (Gm12624)
predicted gene 12624 		ENSMUST00000177615 (Gm12624-001) 60666684-60667065 unprocessed_pseudogene
ENSMUSG00000095680 (Gm12627)
predicted gene 12627 		ENSMUST00000178412 (Gm12627-001) 60600927-60601308 unprocessed_pseudogene
ENSMUSG00000096088 (Gm12614)
predicted gene 12614 		ENSMUST00000179586 (Gm12614-001) 60619346-60619727 unprocessed_pseudogene
ENSMUSG00000096363 (Gm12621)
predicted gene 12621 		ENSMUST00000177760 (Gm12621-001) 60591721-60592102 unprocessed_pseudogene
ENSMUSG00000096483 (Gm12615)
predicted gene 12615 		ENSMUST00000177970 (Gm12615-001) 60628582-60628963 unprocessed_pseudogene
ENSMUSG00000096745 (Gm12622)
predicted gene 12622 		ENSMUST00000177975 (Gm12622-001) 60560924-60561305 processed_pseudogene
ENSMUSG00000097913 (Gm26837)
predicted gene, 26837 		ENSMUST00000180821 (Gm26837-201) 60573527-60633113 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000E2_0001ENSG00000091542ENST00000399138ENST00000490106ENST00000541285ENSG00000131899ENST00000316843ENST00000621229ENSG00000177731ENST00000327031ENST00000459958ENST00000545457ENST00000577398ENST00000578101ENST00000579294ENST00000580453ENST00000584444CIL_0000E2_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091542 ENST00000399138 42.890±0.00 35.360±0.00 5.818±0.00 31.922±15.88 23.678±13.85 28.362±16.27 36.866±24.61 28.452±9.31 24.247±3.01 26.344±15.65 83.953±37.42 32.041±18.91 22.930±1.51 88.820±18.34
ENST00000490106 N/A N/A N/A 3.939±0.00 2.058±0.00 N/A 2.799±0.00 N/A 4.098±0.00 2.673±0.00 N/A 4.481±0.79 N/A N/A
ENST00000541285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.430±0.00 16.731±0.00 41.198±0.00
ENSG00000131899 ENST00000316843 N/A N/A N/A 11.492±8.32 N/A N/A N/A N/A N/A N/A N/A 14.229±1.15 8.083±0.01 N/A
ENST00000479155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621229 N/A N/A N/A 18.706±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177731 ENST00000327031 N/A N/A N/A 7.079±0.00 N/A N/A 15.482±0.00 N/A 4.499±2.36 17.640±0.00 119.918±0.00 23.762±11.24 23.661±4.68 N/A
ENST00000459958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.159±0.00 59.498±0.00 76.936±0.00
ENST00000461110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545457 14.575±0.00 22.044±0.00 N/A 1.901±0.00 23.570±0.00 12.875±11.41 17.067±0.00 15.899±0.00 3.103±1.30 10.030±7.99 111.566±0.00 12.414±3.94 12.502±0.83 16.399±1.40
ENST00000577398 N/A N/A N/A N/A N/A N/A N/A N/A 13.371±0.00 45.473±0.00 N/A N/A N/A N/A
ENST00000577402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578101 N/A N/A N/A 2.061±0.00 N/A 2.204±0.00 N/A 5.623±0.00 N/A 2.174±0.00 7.668±0.00 2.281±0.00 N/A N/A
ENST00000578558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579294 31.110±0.00 30.246±0.00 2.220±0.00 N/A 17.035±13.06 13.023±7.74 6.542±4.10 9.882±0.00 2.063±0.00 2.794±0.00 55.325±0.00 9.696±7.79 23.580±0.00 31.257±4.28
ENST00000580453 N/A N/A N/A N/A N/A N/A N/A 52.192±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584444 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.297±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002812 ENSMUST00000002889 50.158±0.67 47.745±2.44 48.243±0.31 27.076±7.72 49.330±8.17 65.531±8.11 30.976±6.27 31.484±3.81 14.849±1.40 54.624±7.89 20.536±2.16 56.378±12.88 33.841±8.19 7.544±1.02
ENSMUST00000137226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020536 ENSMUST00000052346 14.988±0.68 18.713±4.93 N/A 12.352±5.10 12.584±2.77 10.643±1.69 N/A 4.729±0.18 3.786±1.01 11.391±3.17 N/A 22.781±4.91 N/A 2.010±0.55
ENSMUST00000108719 16.315±2.29 13.903±3.83 12.636±0.27 29.309±18.60 18.151±0.83 16.759±2.63 7.364±1.11 9.162±2.00 5.418±2.03 18.537±0.79 3.594±0.42 31.371±11.10 8.648±2.07 4.547±0.35
ENSMUST00000128749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042650 ENSMUST00000044250 14.842±1.28 31.978±2.05 10.074±1.16 6.205±1.08 18.464±4.46 23.316±0.79 14.024±0.56 23.817±1.38 11.335±3.74 21.124±1.03 23.761±0.59 21.785±9.09 10.100±2.85 7.513±3.18
ENSMUST00000134770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084034 ENSMUST00000121268 0.272±0.00 N/A N/A N/A N/A 0.242±0.00 0.131±0.00 N/A 0.219±0.06 0.188±0.00 N/A 0.962±0.41 0.020±0.00 0.266±0.00
ENSMUSG00000084273 ENSMUST00000122193 0.173±0.02 N/A N/A N/A 0.277±0.14 1.009±0.37 N/A 0.271±0.15 N/A N/A N/A 1.040±0.72 N/A 0.287±0.00
ENSMUSG00000084335 ENSMUST00000117369 N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.18 N/A N/A 0.592±0.00 N/A N/A
ENSMUSG00000093924 ENSMUST00000119849 N/A N/A 0.005±0.00 0.003±0.00 0.017±0.00 N/A N/A 0.047±0.02 0.012±0.01 N/A N/A 0.072±0.01 0.003±0.00 0.033±0.02
ENSMUSG00000093978 ENSMUST00000140182 N/A N/A 0.005±0.00 0.002±0.00 N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.024±0.01
ENSMUSG00000094005 ENSMUST00000179122 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000094278 ENSMUST00000117339 N/A N/A N/A 0.006±0.00 0.017±0.00 0.059±0.03 N/A 0.025±0.01 0.012±0.00 0.018±0.00 N/A 0.068±0.01 N/A N/A
ENSMUSG00000094566 ENSMUST00000119791 N/A N/A 0.005±0.00 0.002±0.00 N/A 0.030±0.00 0.016±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.03
ENSMUSG00000095136 ENSMUST00000118594 N/A N/A N/A 0.021±0.00 N/A 0.266±0.00 N/A 0.121±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000095291 ENSMUST00000180323 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095605 ENSMUST00000177615 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095680 ENSMUST00000178412 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096088 ENSMUST00000179586 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096363 ENSMUST00000177760 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096483 ENSMUST00000177970 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096745 ENSMUST00000177975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A
ENSMUSG00000097913 ENSMUST00000180821 N/A N/A 0.025±0.00 0.009±0.00 N/A N/A N/A N/A 0.014±0.01 N/A 0.029±0.00 N/A N/A N/A

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