C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003622 Slc25a1-001 ENSMUSG00000003528 10090 - 16:17925211-17928219 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003622 376.315±50.75 343.266±70.38 29.230±3.02 38.445±0.96 604.432±130.45 81.235±7.91 18.721±8.88 126.638±6.19 90.295±58.64 82.474±2.34 2.112±1.52 84.201±32.13 10.679±5.88 18.640±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_000244 CIL_000244_0002 CGP 16:17913107-17928219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215882 SLC25A1-001 protein_coding Homo_sapiens 0 1197
ENST00000451283 SLC25A1-003 protein_coding Homo_sapiens 0 1068
ENST00000461267 SLC25A1-005 processed_transcript Homo_sapiens 0 684
ENST00000468824 SLC25A1-004 processed_transcript Homo_sapiens 0.000000000001 77
ENST00000470922 SLC25A1-002 retained_intron Homo_sapiens 0 798

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