C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptonemal complex central element protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003922 Syce2-002 ENSMUSG00000003824 10090 + 8:84872193-84887456 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003922 0.482±0.39 0.350±0.16 1.002±0.21 3.423±2.19 0.719±0.25 0.585±0.12 0.251±0.05 1.382±0.73 6.694±4.71 0.567±0.20 0.287±0.15 1.800±1.46 16.993±4.11 44.685±31.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230
CIL_0006LV CIL_0006LV_0002 CGP 8:84856989-84888221
CIL_00076Z CIL_00076Z_0002 CGP 8:84872111-84893921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 ISS synaptonemal complex
GO:0000801 IDA central element
GO:0005515 IPI protein binding
GO:0007130 IC synaptonemal complex assembly

Homologs

No Homologs available.

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