C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cellular retinoic acid binding protein II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005019 Crabp2-001 ENSMUSG00000004885 10090 + 3:87948666-87953376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005019
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005019 2.061±0.41 0.374±0.12 0.383±0.24 6.600±3.74 1.697±0.58 0.078±0.04 0.508±0.11 0.242±0.28 8.451±0.36 0.111±0.07 11.683±3.65 6.205±4.27 0.522±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001972 IDA retinoic acid binding
GO:0005215 IEA transporter activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0016918 IEA retinal binding
GO:0019841 IEA retinol binding
GO:0035115 IMP embryonic forelimb morphogenesis
GO:0042573 IDA retinoic acid metabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368220 CRABP2-002 protein_coding Homo_sapiens 0 326
ENST00000368221 CRABP2-003 protein_coding Homo_sapiens 0 538
ENST00000368222 CRABP2-001 protein_coding Homo_sapiens 0 538
ENST00000621784 CRABP2-201 protein_coding Homo_sapiens 0 538

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