C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000005952 Slc30a4-001 ENSMUSG00000005802 10090 - 2:122681233-122702639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005952 5.150±1.09 2.574±0.46 4.000±0.30 4.509±0.76 3.824±1.86 4.734±2.14 1.769±0.37 2.818±0.21 1.004±0.33 2.756±0.20 2.925±0.79 4.243±2.05 10.949±5.10 5.653±2.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C8 CIL_0004C8_0003 CGP 2:122636986-122702663
CIL_0004QN CIL_0004QN_0003 CGP 2:122681233-122749475

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005770 IEA late endosome
GO:0006829 IEA zinc ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0009636 IEA response to toxic substance
GO:0016021 IEA integral component of membrane
GO:0055069 IMP zinc ion homeostasis
GO:0061088 IEA regulation of sequestering of zinc ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261867 SLC30A4-001 protein_coding Homo_sapiens 0 1664

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