C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007180-ENSDARG00000042933 CGP 7955 18:4919832-4933883
GeneTranscriptPositionBiotype
ENSDARG00000007180 (slc30a4)
solute carrier family 30 (zinc transporter), member 4 		ENSDART00000007797 (slc30a4-001) 4919832-4929657 protein_coding
ENSDARG00000042933 (bloc1s6)
biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 		ENSDART00000063024 (bloc1s6-201) 4930292-4933866 protein_coding
ENSDART00000142945 (bloc1s6-001) 4930292-4933883 protein_coding
CIL_0004QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104154-ENSG00000104164 CGP 9606 15:45479611-45615999
GeneTranscriptPositionBiotype
ENSG00000104154 (SLC30A4)
solute carrier family 30 (zinc transporter), member 4 		ENST00000261867 (SLC30A4-001) 45479611-45522807 protein_coding
ENST00000559667 (SLC30A4-002) 45502051-45522236 processed_transcript
ENSG00000104164 (BLOC1S6)
biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 		ENST00000220531 (BLOC1S6-001) 45587123-45609711 protein_coding
ENST00000562384 (BLOC1S6-007) 45587352-45606527 protein_coding
ENST00000563000 (BLOC1S6-013) 45587560-45606692 processed_transcript
ENST00000563160 (BLOC1S6-016) 45587746-45606695 processed_transcript
ENST00000564310 (BLOC1S6-020) 45592124-45615999 nonsense_mediated_decay
ENST00000564765 (BLOC1S6-019) 45587825-45606818 protein_coding
ENST00000565216 (BLOC1S6-012) 45587424-45606671 protein_coding
ENST00000565323 (BLOC1S6-015) 45587617-45606585 protein_coding
ENST00000565409 (BLOC1S6-018) 45587785-45606601 protein_coding
ENST00000565727 (BLOC1S6-017) 45587772-45606801 processed_transcript
ENST00000566184 (BLOC1S6-011) 45587379-45605773 retained_intron
ENST00000566753 (BLOC1S6-002) 45587355-45599562 protein_coding
ENST00000566801 (BLOC1S6-014) 45587590-45605470 protein_coding
ENST00000567461 (BLOC1S6-006) 45587236-45606981 protein_coding
ENST00000567523 (BLOC1S6-003) 45587379-45607773 nonsense_mediated_decay
ENST00000567740 (BLOC1S6-005) 45587214-45607046 processed_transcript
ENST00000568597 (BLOC1S6-010) 45587376-45606607 nonsense_mediated_decay
ENST00000568816 (BLOC1S6-004) 45587591-45609710 protein_coding
ENST00000568963 (BLOC1S6-008) 45587352-45606529 nonsense_mediated_decay
ENST00000569076 (BLOC1S6-009) 45587353-45606486 protein_coding
ENSG00000200419 (Y_RNA)
Y RNA 		ENST00000363549 (Y_RNA.1-346) 45591984-45592085 misc_RNA
ENSG00000259681 (RP11-96O20.2)
 ENST00000557965 (RP11-96O20.2-001) 45558598-45562877 lincRNA
CIL_0004QN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005802-ENSMUSG00000005804 CGP 10090 2:122681233-122749475
GeneTranscriptPositionBiotype
ENSMUSG00000005802 (Slc30a4)
solute carrier family 30 (zinc transporter), member 4 		ENSMUST00000005952 (Slc30a4-001) 122681233-122702639 protein_coding
ENSMUST00000099457 (Slc30a4-002) 122683398-122702663 protein_coding
ENSMUSG00000005804 (Bloc1s6)
biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 		ENSMUST00000005954 (Bloc1s6-001) 122738503-122749475 protein_coding
ENSMUST00000127595 (Bloc1s6-003) 122738513-122745980 processed_transcript
ENSMUST00000129690 (Bloc1s6-006) 122738559-122747006 processed_transcript
ENSMUST00000145037 (Bloc1s6-005) 122738530-122746046 processed_transcript
ENSMUST00000146449 (Bloc1s6-004) 122738527-122739159 processed_transcript
ENSMUST00000148460 (Bloc1s6-002) 122738519-122748099 processed_transcript
ENSMUSG00000085633 (Bloc1s6os)
biogenesis of lysosomal organelles complex-1, subunit 6, pallidin, opposite strand 		ENSMUST00000150154 (Bloc1s6os-001) 122733290-122738362 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QN_0001ENSDARG00000007180ENSDART00000007797ENSDARG00000042933ENSDART00000063024ENSDART00000142945CIL_0004QN_0002ENSG00000104154ENST00000261867ENST00000559667ENSG00000104164ENST00000220531ENST00000562384ENST00000563000ENST00000563160ENST00000564310ENST00000564765ENST00000565216ENST00000565323ENST00000565409ENST00000565727ENST00000566184ENST00000566753ENST00000566801ENST00000567461ENST00000567523ENST00000567740ENST00000568597ENST00000568816ENST00000568963ENST00000569076ENSG00000200419ENST00000363549ENSG00000259681ENST00000557965CIL_0004QN_0003ENSMUSG00000005802ENSMUST00000005952ENSMUST00000099457ENSMUSG00000005804ENSMUST00000005954ENSMUST00000127595ENSMUST00000129690ENSMUST00000145037ENSMUST00000146449ENSMUST00000148460ENSMUSG00000085633ENSMUST00000150154
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QN_0001ENSDARG00000007180ENSDART00000007797ENSDARG00000042933ENSDART00000063024ENSDART00000142945CIL_0004QN_0002ENSG00000104154ENST00000261867ENSG00000104164ENST00000220531ENST00000566753ENSG00000200419ENST00000363549ENSG00000259681ENST00000557965CIL_0004QN_0003ENSMUSG00000005802ENSMUST00000005952ENSMUST00000099457ENSMUSG00000005804ENSMUST00000005954ENSMUST00000127595ENSMUST00000129690ENSMUST00000145037ENSMUST00000148460ENSMUSG00000085633ENSMUST00000150154
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007180 ENSDART00000007797 N/A N/A N/A 6.286±1.22 N/A N/A 7.845±6.10 3.717±0.64 0.518±0.00 N/A 3.882±0.00 N/A N/A N/A
ENSDARG00000042933 ENSDART00000063024 N/A N/A N/A 15.163±9.48 N/A N/A 87.006±23.54 54.671±0.00 0.425±0.00 N/A 33.847±0.00 N/A N/A N/A
ENSDART00000142945 N/A N/A N/A 17.220±12.37 N/A N/A 17.637±17.18 9.300±2.01 1.224±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104154 ENST00000261867 2.375±0.00 1.512±0.00 1.060±0.00 1.768±0.70 1.538±0.29 N/A 0.621±0.14 1.500±0.72 0.443±0.00 0.363±0.00 0.271±0.11 1.013±0.82 1.061±0.20 4.295±0.03
ENST00000559667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104164 ENST00000220531 6.614±0.00 5.049±0.00 3.397±0.00 3.610±1.23 4.380±1.35 4.022±0.51 2.480±0.40 2.658±0.56 3.077±0.40 4.083±0.87 3.250±0.00 6.626±2.05 4.717±4.19 5.000±2.35
ENST00000562384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566753 N/A N/A 8.044±0.00 7.175±0.00 11.243±0.00 8.698±0.00 9.613±0.00 6.310±0.00 12.623±0.00 11.449±0.00 2.589±0.00 14.366±0.00 N/A 8.092±0.00
ENST00000566801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200419 ENST00000363549 N/A 0.192±0.00 N/A 0.566±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259681 ENST00000557965 N/A 0.095±0.00 N/A 0.035±0.00 0.247±0.00 N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.030±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005802 ENSMUST00000005952 5.150±1.09 2.574±0.46 4.000±0.30 4.509±0.76 3.824±1.86 4.734±2.14 1.769±0.37 2.818±0.21 1.004±0.33 2.756±0.20 2.925±0.79 4.243±2.05 10.949±5.10 5.653±2.77
ENSMUST00000099457 N/A 9.048±2.56 N/A N/A 1.826±0.37 4.725±2.22 N/A N/A N/A 1.070±0.00 N/A 3.496±1.12 3.201±0.00 12.437±5.69
ENSMUSG00000005804 ENSMUST00000005954 1.899±0.11 2.551±0.77 1.097±0.00 1.466±0.00 2.205±0.44 3.307±0.68 1.465±0.05 2.888±0.26 2.230±0.30 2.229±0.20 N/A 2.216±0.86 3.047±0.19 N/A
ENSMUST00000127595 N/A 9.871±0.00 N/A N/A N/A 8.062±0.00 N/A N/A N/A N/A N/A N/A N/A 11.567±2.28
ENSMUST00000129690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.048±0.14 N/A N/A 2.759±0.00
ENSMUST00000145037 13.944±0.36 18.425±4.07 N/A N/A 12.453±3.19 16.512±4.10 N/A N/A 5.030±0.00 9.543±0.62 N/A 13.439±1.85 43.793±1.76 9.953±0.00
ENSMUST00000146449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148460 11.862±1.98 8.528±1.07 14.978±2.74 16.607±7.53 11.694±2.89 8.628±3.90 11.436±0.72 10.324±1.61 7.776±2.05 9.779±1.81 6.269±1.09 13.631±4.53 7.392±2.82 7.056±3.34
ENSMUSG00000085633 ENSMUST00000150154 0.077±0.00 N/A 0.102±0.07 0.033±0.01 N/A N/A 0.151±0.00 0.082±0.00 0.077±0.01 0.168±0.05 0.059±0.01 0.284±0.11 0.162±0.17 1.238±0.38

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