C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398896 USP19-004 ENSG00000172046 9606 - 3:49108046-49117978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000398896
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000398896 1.403±0.00 1.877±0.89 2.910±0.00 2.823±0.00 3.262±0.00 6.209±0.00 4.277±0.00 6.336±0.00 5.277±2.66 4.737±0.66 10.561±3.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005N5 CIL_0005N5_0002 CGP 3:49108046-49133118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178075 Usp19-204 protein_coding Mus_musculus 0 4337
ENSMUST00000085044 Usp19-202 protein_coding Mus_musculus 0 4337
ENSMUST00000166103 Usp19-203 protein_coding Mus_musculus 0 3938
ENSMUST00000006854 Usp19-201 protein_coding Mus_musculus 0 3794

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