C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Wilms tumour 1-associating protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007007 Wtap-001 ENSMUSG00000060475 10090 - 17:12966799-12992259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007007 7.107±2.70 5.624±0.99 7.865±0.71 7.230±2.65 7.070±1.60 5.624±1.58 3.267±0.84 8.633±1.02 8.715±5.17 10.054±1.17 2.913±1.01 6.596±1.87 11.997±5.82 1.991±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070
CIL_0003I8 CIL_0003I8_0002 CGP 17:12942890-12992546
CIL_0003I5 CIL_0003I5_0002 CGP 17:12966796-13018119

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000062552 wtap-001 protein_coding Danio_rerio 0 505
ENSDART00000147359 wtap-002 protein_coding Danio_rerio 0 326
ENST00000337387 WTAP-002 protein_coding Homo_sapiens 0 713
ENST00000358372 WTAP-001 protein_coding Homo_sapiens 0 2538
ENST00000416077 RP3-437C15.1-001 processed_pseudogene Homo_sapiens 0 630
ENST00000614346 WTAP-201 protein_coding Homo_sapiens 0 676
ENST00000621533 WTAP-202 protein_coding Homo_sapiens 0 2573

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