C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416077 RP3-437C15.1-001 ENSG00000232702 9606 - 6:51410081-51410537 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000416077
Transcript ID Breast Ovary Placenta Testis
ENST00000416077 0.026±0.00 0.186±0.00 0.102±0.01 0.108±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MX CIL_0005MX_0001 CGP 6:50818723-52087625
CIL_00092F CIL_00092F_0001 VISTA 6:50983870-51584912
CIL_000824 CIL_000824_0001 VISTA 6:51351096-51952217

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118761 Gm14292-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000160781 Wtap-003 protein_coding Mus_musculus 0 638
ENSMUST00000159986 Wtap-004 protein_coding Mus_musculus 0 638
ENSMUST00000007007 Wtap-001 protein_coding Mus_musculus 0 630
ENSMUST00000159551 Wtap-002 protein_coding Mus_musculus 0 630
ENSMUST00000159104 Wtap-007 protein_coding Mus_musculus 0 553
ENSMUST00000098958 Gm7381-201 processed_pseudogene Mus_musculus 0 422
ENSDART00000147359 wtap-002 protein_coding Danio_rerio 0 327
ENSDART00000062552 wtap-001 protein_coding Danio_rerio 0 320
ENSMUST00000162395 Wtap-005 protein_coding Mus_musculus 0 289
ENSMUST00000161901 Wtap-006 processed_transcript Mus_musculus 3e-39 165

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