C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00061V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130299-ENSG00000130300 CGP 9606 19:17334920-17377350
GeneTranscriptPositionBiotype
ENSG00000130299 (GTPBP3)
GTP binding protein 3 (mitochondrial) 		ENST00000324894 (GTPBP3-004) 17337544-17342735 protein_coding
ENST00000358792 (GTPBP3-006) 17337555-17342022 protein_coding
ENST00000361619 (GTPBP3-001) 17334920-17341968 protein_coding
ENST00000593297 (GTPBP3-025) 17337559-17338740 processed_transcript
ENST00000594018 (GTPBP3-022) 17337592-17341056 nonsense_mediated_decay
ENST00000594345 (GTPBP3-013) 17336692-17338741 processed_transcript
ENST00000594703 (GTPBP3-028) 17338760-17339479 retained_intron
ENST00000595194 (GTPBP3-029) 17340946-17341664 retained_intron
ENST00000595381 (GTPBP3-012) 17336686-17337348 processed_transcript
ENST00000595951 (GTPBP3-014) 17336728-17337975 processed_transcript
ENST00000596001 (GTPBP3-021) 17337586-17339161 retained_intron
ENST00000596125 (GTPBP3-030) 17339389-17341631 retained_intron
ENST00000596166 (GTPBP3-019) 17337559-17339487 processed_transcript
ENST00000596218 (GTPBP3-016) 17336973-17339015 processed_transcript
ENST00000596941 (GTPBP3-017) 17336873-17338719 processed_transcript
ENST00000598038 (GTPBP3-002) 17336724-17342730 processed_transcript
ENST00000598493 (GTPBP3-007) 17337559-17341125 nonsense_mediated_decay
ENST00000598532 (GTPBP3-010) 17335000-17337260 processed_transcript
ENST00000599329 (GTPBP3-023) 17337618-17338433 retained_intron
ENST00000599429 (GTPBP3-018) 17337517-17338451 retained_intron
ENST00000600610 (GTPBP3-009) 17337588-17339572 nonsense_mediated_decay
ENST00000600625 (GTPBP3-005) 17337555-17342723 protein_coding
ENST00000600995 (GTPBP3-015) 17336728-17338708 processed_transcript
ENST00000601213 (GTPBP3-011) 17335000-17338675 nonsense_mediated_decay
ENST00000601261 (GTPBP3-024) 17337559-17338682 retained_intron
ENST00000601983 (GTPBP3-026) 17338196-17339144 retained_intron
ENST00000602056 (GTPBP3-027) 17338758-17341325 retained_intron
ENST00000602165 (GTPBP3-020) 17337571-17338743 nonsense_mediated_decay
ENSG00000130300 (PLVAP)
plasmalemma vesicle associated protein 		ENST00000252590 (PLVAP-001) 17351448-17377350 protein_coding
ENST00000595816 (PLVAP-003) 17351450-17366151 protein_coding
ENST00000599426 (PLVAP-002) 17365416-17377342 protein_coding
ENSG00000269350 (CTD-2278I10.1)
 ENST00000597592 (CTD-2278I10.1-001) 17360932-17362753 antisense
CIL_00061V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007610-ENSMUSG00000034845 CGP 10090 8:71488103-71511769
GeneTranscriptPositionBiotype
ENSMUSG00000007610 (Gtpbp3)
GTP binding protein 3 		ENSMUST00000007754 (Gtpbp3-001) 71488103-71493400 protein_coding
ENSMUST00000095259 (Gtpbp3-002) 71488721-71493400 nonsense_mediated_decay
ENSMUST00000124349 (Gtpbp3-004) 71488743-71493400 retained_intron
ENSMUST00000127741 (Gtpbp3-003) 71488751-71493400 nonsense_mediated_decay
ENSMUST00000132907 (Gtpbp3-006) 71488734-71489578 retained_intron
ENSMUST00000146551 (Gtpbp3-007) 71489459-71491411 retained_intron
ENSMUST00000150969 (Gtpbp3-005) 71488728-71499583 nonsense_mediated_decay
ENSMUST00000168847 (Gtpbp3-201) 71488103-71493400 protein_coding
ENSMUSG00000034845 (Plvap)
plasmalemma vesicle associated protein 		ENSMUST00000048452 (Plvap-201) 71497754-71511769 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061V_0001ENSG00000130299ENST00000324894ENST00000358792ENST00000361619ENST00000593297ENST00000594345ENST00000595194ENST00000595381ENST00000595951ENST00000596001ENST00000596125ENST00000596941ENST00000598038ENST00000599329ENST00000600625ENST00000600995ENST00000601213ENSG00000130300ENST00000252590ENST00000599426ENSG00000269350ENST00000597592CIL_00061V_0002ENSMUSG00000007610ENSMUST00000007754ENSMUST00000095259ENSMUST00000124349ENSMUST00000127741ENSMUST00000146551ENSMUST00000150969ENSMUSG00000034845ENSMUST00000048452
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130299 ENST00000324894 N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 N/A 0.474±0.00
ENST00000358792 1.700±0.00 2.311±0.00 N/A 1.152±0.85 1.177±0.00 0.324±0.00 0.727±0.00 1.073±0.00 N/A 1.719±0.00 N/A 4.019±0.00 N/A N/A
ENST00000361619 N/A N/A N/A 1.038±0.54 1.797±0.43 N/A N/A N/A 0.534±0.08 0.133±0.00 1.079±0.10 N/A N/A N/A
ENST00000593297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.070±0.00
ENST00000594018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 N/A N/A
ENST00000594703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595194 N/A N/A N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595381 N/A N/A 0.725±0.00 N/A 3.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595951 N/A N/A N/A N/A N/A N/A N/A 1.421±0.00 N/A 0.873±0.00 N/A N/A N/A N/A
ENST00000596001 N/A N/A N/A N/A N/A 1.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.993±0.00 N/A N/A
ENST00000596166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596941 N/A N/A N/A N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000598038 N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599329 N/A N/A N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A
ENST00000599429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600625 1.790±0.00 3.166±0.00 N/A 1.416±0.00 2.745±0.00 1.185±0.00 0.787±0.00 0.998±0.66 0.882±0.00 0.489±0.00 0.888±0.00 3.380±0.65 1.447±0.12 1.674±0.00
ENST00000600995 N/A N/A N/A N/A N/A N/A N/A N/A 0.362±0.00 N/A N/A N/A N/A N/A
ENST00000601213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.413±0.00 N/A
ENST00000601261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130300 ENST00000252590 214.958±0.00 219.881±0.00 3.819±0.00 1.292±1.11 77.499±66.05 155.574±150.88 6.775±6.02 37.201±36.56 3.322±0.96 11.461±9.19 15.487±14.08 19.588±11.91 71.895±29.51 22.271±0.00
ENST00000595816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599426 120.345±0.00 N/A 7.035±0.00 N/A 9.898±0.00 N/A 0.741±0.00 N/A 5.976±0.00 3.649±0.00 N/A 63.631±0.00 67.557±0.00 5.735±0.00
ENSG00000269350 ENST00000597592 0.184±0.00 0.466±0.00 N/A 0.031±0.00 0.265±0.00 0.220±0.00 N/A 0.495±0.00 N/A 1.154±0.00 N/A 0.425±0.31 0.164±0.00 0.251±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007610 ENSMUST00000007754 1.848±0.32 N/A 1.661±0.14 0.879±0.00 1.811±0.00 N/A 1.325±0.00 1.111±0.03 N/A 1.226±0.10 N/A N/A 0.627±0.00 0.585±0.21
ENSMUST00000095259 7.245±0.34 15.416±2.80 3.688±0.56 4.770±0.54 8.551±3.41 9.492±1.34 5.336±0.99 6.749±1.39 4.750±0.82 5.681±0.98 1.992±0.37 13.758±1.88 4.569±2.17 0.964±0.48
ENSMUST00000124349 2.647±0.86 2.891±0.31 2.182±0.73 4.130±0.27 2.448±0.35 1.866±0.32 1.283±0.10 1.189±0.23 1.174±0.20 2.244±0.41 0.988±0.02 3.729±1.48 1.274±0.41 0.616±0.17
ENSMUST00000127741 N/A N/A 1.254±0.13 N/A 1.670±0.00 N/A N/A 2.222±0.00 0.707±0.00 N/A 0.770±0.18 3.050±1.16 2.171±1.39 N/A
ENSMUST00000132907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146551 N/A N/A N/A 12.584±0.00 N/A N/A N/A N/A N/A N/A N/A 15.656±0.00 8.085±0.00 1.928±0.00
ENSMUST00000150969 1.710±0.03 7.183±2.19 1.731±0.26 3.535±1.42 2.431±0.34 4.186±1.00 N/A 1.636±0.17 1.647±0.52 2.435±0.69 1.019±0.27 5.258±1.48 1.505±0.48 0.476±0.17
ENSMUST00000168847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034845 ENSMUST00000048452 62.453±16.25 200.914±30.72 32.604±0.56 4.501±1.33 123.384±55.81 90.679±12.79 16.697±2.52 216.477±14.76 32.920±18.20 448.580±177.20 6.221±1.78 41.152±17.79 53.736±42.29 0.641±0.38

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