C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 3 (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600625 GTPBP3-005 ENSG00000130299 9606 + 19:17337555-17342723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000600625
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000600625 1.790±0.00 3.166±0.00 1.416±0.00 2.745±0.00 1.185±0.00 0.787±0.00 0.998±0.66 0.882±0.00 0.489±0.00 0.888±0.00 3.380±0.65 1.447±0.12 1.674±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E0 CIL_0004E0_0002 CGP 19:17323223-17342735
CIL_00061V CIL_00061V_0001 CGP 19:17334920-17377350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006400 IEA tRNA modification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168847 Gtpbp3-201 protein_coding Mus_musculus 0 289
ENSMUST00000150969 Gtpbp3-005 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000124349 Gtpbp3-004 retained_intron Mus_musculus 0 289
ENSMUST00000127741 Gtpbp3-003 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000095259 Gtpbp3-002 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000007754 Gtpbp3-001 protein_coding Mus_musculus 0 289
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 58

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