C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HERPUD family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000008573 Herpud2-201 ENSMUSG00000008429 10090 - 9:25108130-25151781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008573
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008573 17.681±1.17 44.403±6.13 17.726±0.11 10.485±2.69 19.853±8.97 16.978±1.69 9.464±3.43 13.211±2.39 8.592±1.41 25.735±4.40 13.715±0.69 32.163±9.45 12.018±3.21 59.112±21.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SW CIL_0008SW_0002 VISTA 9:24511552-25112154
CIL_00091H CIL_00091H_0002 VISTA 9:24533559-25134351
CIL_0008SR CIL_0008SR_0002 VISTA 9:24560616-25161316
CIL_0009CB CIL_0009CB_0002 VISTA 9:24587072-25190068
CIL_00084T CIL_00084T_0002 VISTA 9:24587105-25190036
CIL_00091N CIL_00091N_0002 VISTA 9:24619749-25221117
CIL_0008SX CIL_0008SX_0002 VISTA 9:24622166-25223116
CIL_00091M CIL_00091M_0002 VISTA 9:24673917-25275039
CIL_00091L CIL_00091L_0002 VISTA 9:24755368-25356389
CIL_0005M2 CIL_0005M2_0002 CGP 9:25108130-25308571

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006986 IEA response to unfolded protein
GO:0007283 IEP spermatogenesis
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311350 HERPUD2-002 protein_coding Homo_sapiens 0 1951
ENST00000396081 HERPUD2-001 protein_coding Homo_sapiens 0 1951
ENST00000413517 HERPUD2-006 protein_coding Homo_sapiens 0 477
ENST00000426180 HERPUD2-007 processed_transcript Homo_sapiens 0 795
ENST00000427455 HERPUD2-003 protein_coding Homo_sapiens 0 363
ENST00000438224 HERPUD2-005 protein_coding Homo_sapiens 0 392
ENST00000603731 HERPUD2-008 protein_coding Homo_sapiens 0 204

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