C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB25, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000008745 Rab25-001 ENSMUSG00000008601 10090 - 3:88542029-88548300 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000008745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000008745 7.743±7.62 0.080±0.02 65.347±12.99 0.665±0.31 16.679±4.54 213.471±8.91 0.891±0.01 21.967±1.10 0.168±0.07 37.891±9.34 0.156±0.07 16.910±6.10 1.620±0.52 0.667±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008284 ISS positive regulation of cell proliferation
GO:0015031 IEA protein transport
GO:0031143 ISS pseudopodium
GO:0031268 ISS pseudopodium organization
GO:0031410 ISS cytoplasmic vesicle
GO:0031489 IEA myosin V binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361084 RAB25-001 protein_coding Homo_sapiens 0 917
ENST00000463614 RAB25-002 processed_transcript Homo_sapiens 0 390
ENST00000473336 RAB25-003 processed_transcript Homo_sapiens 0 531
ENST00000497968 RAB25-004 processed_transcript Homo_sapiens 0 531
ENST00000615862 RAB25-201 protein_coding Homo_sapiens 0 904

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