C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB25, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361084 RAB25-001 ENSG00000132698 9606 + 1:156061160-156070514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000361084
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000361084 0.327±0.00 4.841±0.00 3.105±0.75 7.556±0.00 1.049±0.00 3.060±0.55 11.127±6.74 18.375±11.40 0.348±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008284 IDA positive regulation of cell proliferation
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031143 IDA pseudopodium
GO:0031268 IDA pseudopodium organization
GO:0031410 IDA cytoplasmic vesicle
GO:0031489 IPI myosin V binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008745 Rab25-001 protein_coding Mus_musculus 0 917
ENSMUST00000131775 Rab25-002 protein_coding Mus_musculus 0 701
ENSMUST00000149724 Rab25-003 retained_intron Mus_musculus 0 390

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