C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage gated channel, Shaw-related subfamily, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009617 Kcnc4-201 ENSMUSG00000027895 10090 - 3:107438303-107458898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009617 0.148±0.07 2.269±0.74 3.813±0.14 4.851±2.93 3.569±2.06 0.376±0.11 0.319±0.06 0.240±0.15 0.022±0.01 0.235±0.02 13.428±2.49 0.347±0.17 1.870±1.07 0.300±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0031594 IDA neuromuscular junction
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043679 IDA axon terminus
GO:0046928 IMP regulation of neurotransmitter secretion
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298972 KCNC2-201 protein_coding Homo_sapiens 0 257
ENST00000350228 KCNC2-004 protein_coding Homo_sapiens 0 257
ENST00000369787 KCNC4-004 protein_coding Homo_sapiens 0 2233
ENST00000376959 KCNC3-002 protein_coding Homo_sapiens 0 217
ENST00000393288 KCNC2-002 protein_coding Homo_sapiens 0 257
ENST00000413138 KCNC4-006 protein_coding Homo_sapiens 0 3430
ENST00000438661 KCNC4-003 protein_coding Homo_sapiens 0 2220
ENST00000459877 KCNC4-002 retained_intron Homo_sapiens 0 1142
ENST00000469655 KCNC4-001 nonsense_mediated_decay Homo_sapiens 0 2233
ENST00000477616 KCNC3-005 protein_coding Homo_sapiens 0 217
ENST00000489935 KCNC4-005 retained_intron Homo_sapiens 0 1991
ENST00000540018 KCNC2-003 protein_coding Homo_sapiens 0 257
ENST00000548513 KCNC2-006 protein_coding Homo_sapiens 0 257
ENST00000549446 KCNC2-001 protein_coding Homo_sapiens 0 257
ENST00000550433 KCNC2-005 protein_coding Homo_sapiens 0 257

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