C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shaw-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376959 KCNC3-002 ENSG00000131398 9606 - 19:50311937-50329246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMusclePlacentaTestisENST00000376959
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Placenta Testis
ENST00000376959 0.157±0.00 3.484±2.22 0.245±0.03 0.022±0.00 0.166±0.00 0.303±0.00 0.329±0.27 0.229±0.00 0.164±0.00 0.433±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107905 Kcnc3-004 protein_coding Mus_musculus 0 3051
ENSMUST00000071062 Kcnc3-003 protein_coding Mus_musculus 0 3037
ENSMUST00000107907 Kcnc3-001 protein_coding Mus_musculus 0 2658
ENSMUST00000107906 Kcnc3-002 protein_coding Mus_musculus 0 2590
ENSMUST00000160433 Kcnc1-002 protein_coding Mus_musculus 0 704
ENSMUST00000025202 Kcnc1-001 protein_coding Mus_musculus 0 704
ENSDART00000078249 kcnc3a-201 protein_coding Danio_rerio 0 651
ENSDART00000148662 kcnc3a-002 protein_coding Danio_rerio 0 651
ENSDART00000148861 kcnc3a-001 protein_coding Danio_rerio 0 651
ENSDART00000103356 kcnc2-201 protein_coding Danio_rerio 0 427
ENSDART00000110178 kcnc2-202 protein_coding Danio_rerio 0 427
ENSDART00000149330 kcnc2-002 protein_coding Danio_rerio 0 427
ENSDART00000150039 kcnc2-001 protein_coding Danio_rerio 0 427
ENSMUST00000160234 Kcnc1-003 processed_transcript Mus_musculus 0 322
ENSDART00000055281 kcnc3b-201 protein_coding Danio_rerio 0 248
ENSDART00000132748 kcnc3b-002 processed_transcript Danio_rerio 0 244
ENSMUST00000009617 Kcnc4-201 protein_coding Mus_musculus 0 217
ENSMUST00000055064 Kcna10-001 protein_coding Mus_musculus 0.000000004 69

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