C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Shaw-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477616 KCNC3-005 ENSG00000131398 9606 - 19:50315508-50329377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverOvaryPlacentaTestisENST00000477616
Transcript ID Adrenal Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000477616 0.299±0.00 0.482±0.00 0.245±0.00 4.112±0.00 0.407±0.00 0.089±0.00 0.449±0.32 0.469±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 TAS voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 IEA voltage-gated potassium channel complex
GO:0008219 IEA cell death
GO:0016020 IEA membrane
GO:0030673 IEA axolemma
GO:0031594 IEA neuromuscular junction
GO:0032590 IEA dendrite membrane
GO:0032809 IEA neuronal cell body membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043679 IEA axon terminus
GO:0046928 IEA regulation of neurotransmitter secretion
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107905 Kcnc3-004 protein_coding Mus_musculus 0 2660
ENSMUST00000107907 Kcnc3-001 protein_coding Mus_musculus 0 2658
ENSMUST00000071062 Kcnc3-003 protein_coding Mus_musculus 0 2647
ENSMUST00000107906 Kcnc3-002 protein_coding Mus_musculus 0 2590
ENSMUST00000160433 Kcnc1-002 protein_coding Mus_musculus 0 704
ENSMUST00000025202 Kcnc1-001 protein_coding Mus_musculus 0 704
ENSDART00000078249 kcnc3a-201 protein_coding Danio_rerio 0 651
ENSDART00000148662 kcnc3a-002 protein_coding Danio_rerio 0 651
ENSDART00000148861 kcnc3a-001 protein_coding Danio_rerio 0 651
ENSDART00000103356 kcnc2-201 protein_coding Danio_rerio 0 427
ENSDART00000110178 kcnc2-202 protein_coding Danio_rerio 0 427
ENSDART00000149330 kcnc2-002 protein_coding Danio_rerio 0 427
ENSDART00000150039 kcnc2-001 protein_coding Danio_rerio 0 427
ENSMUST00000160234 Kcnc1-003 processed_transcript Mus_musculus 0 322
ENSDART00000055281 kcnc3b-201 protein_coding Danio_rerio 0 248
ENSDART00000132748 kcnc3b-002 processed_transcript Danio_rerio 0 244
ENSMUST00000009617 Kcnc4-201 protein_coding Mus_musculus 0 217
ENSMUST00000055064 Kcna10-001 protein_coding Mus_musculus 0.000000002 69

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