C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor CP2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009877 Tfcp2-201 ENSMUSG00000009733 10090 - 15:100502799-100552008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009877
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009877 0.839±0.30 3.783±1.15 5.953±2.65 1.994±0.85 1.345±0.60 0.731±0.32 3.035±2.03 1.156±0.42 1.527±0.73 0.797±0.37 4.635±1.51 1.358±0.63 1.915±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033J CIL_00033J_0003 CGP 15:100479570-100552008
CIL_00033K CIL_00033K_0003 CGP 15:100502799-100599984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0045893 TAS positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000084848 tfcp2-201 protein_coding Danio_rerio 0 686
ENSDART00000138416 tfcp2-001 protein_coding Danio_rerio 0 686
ENSDART00000151653 ubp1-002 protein_coding Danio_rerio 0 422
ENSDART00000108775 ubp1-001 protein_coding Danio_rerio 0 422
ENST00000257915 TFCP2-001 protein_coding Homo_sapiens 0 1855
ENST00000546822 TFCP2-007 retained_intron Homo_sapiens 0 652
ENST00000548108 TFCP2-005 protein_coding Homo_sapiens 0 1572
ENST00000548115 TFCP2-004 protein_coding Homo_sapiens 0 942
ENST00000549867 TFCP2-002 protein_coding Homo_sapiens 0 1133

Loading