C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015000 Tmem208-001 ENSMUSG00000014856 10090 + 8:105326354-105329057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000015000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000015000 30.713±4.76 34.427±2.17 23.741±6.28 14.724±5.94 24.072±5.17 45.378±6.96 14.379±1.93 47.958±3.29 41.609±5.61 13.340±1.43 30.321±5.88 39.381±12.50 15.913±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219
CIL_0005K2 CIL_0005K2_0002 CGP 8:105326354-105347953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304800 TMEM208-001 protein_coding Homo_sapiens 0 789
ENST00000561586 TMEM208-006 retained_intron Homo_sapiens 0 425
ENST00000562235 TMEM208-002 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000563168 TMEM208-003 retained_intron Homo_sapiens 0 200
ENST00000563271 TMEM208-009 retained_intron Homo_sapiens 5e-39 165
ENST00000563426 TMEM208-008 processed_transcript Homo_sapiens 0 235
ENST00000563953 TMEM208-007 protein_coding Homo_sapiens 0 717
ENST00000564087 TMEM208-012 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000564649 TMEM208-010 retained_intron Homo_sapiens 0 340
ENST00000565201 TMEM208-011 protein_coding Homo_sapiens 0 534
ENST00000567193 TMEM208-005 retained_intron Homo_sapiens 0 451

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