C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015948 Med28-004 ENSMUSG00000015804 10090 + 5:45521007-45525495 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015948
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015948 32.596±1.26 33.100±5.19 44.930±14.82 30.205±11.43 40.374±10.69 14.431±3.40 59.660±6.46 16.036±9.75 33.373±2.57 13.255±0.90 49.774±16.60 37.242±22.21 92.506±19.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X6 CIL_0005X6_0002 CGP 5:45493374-45529276
CIL_0005X3 CIL_0005X3_0002 CGP 5:45520221-45639501

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237380 MED28-001 protein_coding Homo_sapiens 0 521
ENST00000433137 MED28P4-001 processed_pseudogene Homo_sapiens 0 368
ENST00000444288 MED28P3-001 processed_pseudogene Homo_sapiens 0 375
ENST00000456611 MED28P7-001 processed_pseudogene Homo_sapiens 0 361
ENST00000503945 MED28-002 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000612711 MED28-201 protein_coding Homo_sapiens 0 514

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