C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005X3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118579-ENSG00000047662 CGP 9606 4:17614631-17781512
GeneTranscriptPositionBiotype
ENSG00000047662 (FAM184B)
family with sequence similarity 184, member B
ENST00000265018 (FAM184B-003) 17629306-17781512 protein_coding
ENSG00000118579 (MED28)
mediator complex subunit 28
ENST00000237380 (MED28-001) 17614631-17634105 protein_coding
ENST00000499786 (MED28-004) 17630924-17632439 processed_transcript
ENST00000503945 (MED28-002) 17614664-17628170 nonsense_mediated_decay
ENST00000506409 (MED28-003) 17614648-17620081 retained_intron
ENST00000612711 (MED28-201) 17614652-17624018 protein_coding
CIL_0005X3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015804-ENSMUSG00000015879 CGP 10090 5:45520221-45639501
GeneTranscriptPositionBiotype
ENSMUSG00000015804 (Med28)
mediator complex subunit 28
ENSMUST00000015948 (Med28-004) 45521007-45525495 processed_transcript
ENSMUST00000118833 (Med28-003) 45520317-45525599 protein_coding
ENSMUST00000119579 (Med28-002) 45520307-45525598 protein_coding
ENSMUST00000139586 (Med28-005) 45522139-45525178 processed_transcript
ENSMUST00000156481 (Med28-001) 45520221-45529276 protein_coding
ENSMUSG00000015879 (Fam184b)
family with sequence similarity 184, member B
ENSMUST00000016023 (Fam184b-201) 45529706-45639501 protein_coding
ENSMUSG00000097825 (9630001P10Rik)
RIKEN cDNA 9630001P10 gene
ENSMUST00000181083 (9630001P10Rik-201) 45639289-45645469 lincRNA
ENSMUST00000181335 (9630001P10Rik-202) 45638705-45643768 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X3_0001ENSG00000047662ENST00000265018ENSG00000118579ENST00000237380ENST00000499786ENST00000503945ENST00000506409ENST00000612711CIL_0005X3_0002ENSMUSG00000015804ENSMUST00000015948ENSMUST00000118833ENSMUST00000119579ENSMUST00000139586ENSMUST00000156481ENSMUSG00000015879ENSMUST00000016023ENSMUSG00000097825ENSMUST00000181083ENSMUST00000181335
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X3_0001ENSG00000047662ENST00000265018ENSG00000118579ENST00000237380ENST00000503945ENST00000612711CIL_0005X3_0002ENSMUSG00000015804ENSMUST00000015948ENSMUST00000118833ENSMUST00000119579ENSMUST00000156481ENSMUSG00000015879ENSMUST00000016023ENSMUSG00000097825ENSMUST00000181083ENSMUST00000181335
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000047662 ENST00000265018 0.795±0.00 N/A 0.730±0.00 N/A 1.814±0.00 0.887±0.00 0.919±0.00 2.184±0.00 1.059±0.00 1.230±0.47 0.984±0.57 1.386±0.63 N/A 2.002±0.00
ENSG00000118579 ENST00000237380 N/A N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A 2.723±0.00 N/A 4.065±0.34 4.959±0.00 5.845±0.00
ENST00000499786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.625±0.00 N/A N/A N/A
ENST00000506409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612711 12.340±0.00 15.363±0.00 N/A N/A 9.650±0.00 8.649±4.40 6.707±0.00 13.455±0.00 6.460±0.00 35.099±0.00 9.261±0.00 37.014±18.06 40.151±22.47 39.670±22.85
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015804 ENSMUST00000015948 32.596±1.26 N/A 33.100±5.19 44.930±14.82 30.205±11.43 40.374±10.69 14.431±3.40 59.660±6.46 16.036±9.75 33.373±2.57 13.255±0.90 49.774±16.60 37.242±22.21 92.506±19.33
ENSMUST00000118833 24.468±5.52 115.495±3.22 25.005±4.47 31.397±6.71 33.804±3.24 34.109±14.46 15.886±1.91 54.872±4.23 17.838±4.25 40.050±7.50 16.025±2.04 37.667±13.81 27.007±14.65 78.420±30.31
ENSMUST00000119579 N/A N/A N/A N/A 16.342±0.00 N/A N/A N/A N/A N/A N/A N/A 17.787±5.38 N/A
ENSMUST00000139586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156481 1.357±0.44 N/A 1.768±0.20 2.573±0.75 1.433±0.33 2.786±0.00 0.567±0.10 2.230±0.42 1.070±0.51 1.997±0.07 0.930±0.15 3.744±1.73 1.279±0.61 3.260±0.13
ENSMUSG00000015879 ENSMUST00000016023 0.024±0.01 N/A 0.018±0.01 1.347±1.09 0.027±0.01 0.110±0.03 0.013±0.00 0.086±0.02 0.041±0.02 0.039±0.01 0.042±0.01 0.180±0.11 0.050±0.05 0.167±0.06
ENSMUSG00000097825 ENSMUST00000181083 N/A 0.053±0.00 N/A N/A 0.027±0.01 0.098±0.02 0.011±0.00 0.056±0.01 0.022±0.00 N/A 0.017±0.00 0.112±0.08 0.013±0.00 0.062±0.00
ENSMUST00000181335 0.041±0.00 0.047±0.02 0.035±0.00 0.334±0.03 0.052±0.02 0.199±0.06 N/A 0.042±0.01 0.039±0.02 0.033±0.00 0.023±0.01 0.190±0.12 0.047±0.02 0.118±0.04

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