C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, beta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016315 Lamb3-001 ENSMUSG00000026639 10090 + 1:193301957-193343878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000016315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000016315 1.574±1.07 0.159±0.00 8.162±0.51 0.053±0.02 2.513±0.74 19.774±4.01 0.428±0.14 0.207±0.17 9.736±2.16 0.665±0.11 0.674±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00089N CIL_00089N_0002 VISTA 1:193149329-193750185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 TAS extracellular region
GO:0005604 IDA basement membrane
GO:0005610 IDA laminin-5 complex
GO:0007155 IEA cell adhesion
GO:0050873 IDA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356082 LAMB3-001 protein_coding Homo_sapiens 0 3073
ENST00000367030 LAMB3-002 protein_coding Homo_sapiens 0 3064
ENST00000391911 LAMB3-201 protein_coding Homo_sapiens 0 3064
ENST00000415782 LAMB3-003 protein_coding Homo_sapiens 0 518

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