C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016452 Ube2a-001 ENSMUSG00000016308 10090 + X:36874358-36884215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016452 8.945±0.76 19.557±1.67 13.097±1.13 10.840±0.83 11.543±2.12 14.498±2.01 9.780±0.45 9.855±1.31 9.434±2.03 10.261±1.28 9.633±0.59 8.432±1.19 29.228±9.19 4.168±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S7 CIL_0004S7_0002 CGP X:36823737-36884215
CIL_0001UR CIL_0001UR_0002 CGP X:36874358-36902899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0000790 IDA nuclear chromatin
GO:0001701 IGI in utero embryonic development
GO:0001741 IDA XY body
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006281 IEA DNA repair
GO:0008284 IEA positive regulation of cell proliferation
GO:0009411 IEA response to UV
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IEA ubiquitin protein ligase binding
GO:0033503 ISS HULC complex
GO:0033522 IEA histone H2A ubiquitination
GO:0051865 IEA protein autoubiquitination
GO:0060135 IMP maternal process involved in female pregnancy
GO:0070936 ISS protein K48-linked ubiquitination
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346330 UBE2A-002 protein_coding Homo_sapiens 0 490
ENST00000371558 UBE2A-001 protein_coding Homo_sapiens 0 941
ENST00000371569 UBE2A-003 retained_intron Homo_sapiens 0 713

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