C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017090 Kctd5-001 ENSMUSG00000016946 10090 - 17:24047734-24073485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017090 11.582±4.51 10.626±1.20 14.327±2.03 19.539±11.80 12.386±4.86 36.974±6.77 4.264±0.43 7.664±0.89 5.484±3.34 16.621±3.30 3.499±0.09 25.251±8.73 14.808±3.43 5.349±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ER CIL_0005ER_0002 CGP 17:24047734-24150924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0008150 ND biological_process
GO:0032403 ISO protein complex binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301738 KCTD5-001 protein_coding Homo_sapiens 0 1432
ENST00000402077 KCTD17-001 protein_coding Homo_sapiens 0 246
ENST00000403888 KCTD17-002 protein_coding Homo_sapiens 0 246
ENST00000421900 KCTD17-007 nonsense_mediated_decay Homo_sapiens 8e-26 121
ENST00000427818 AC110299.5-001 processed_pseudogene Homo_sapiens 0 547
ENST00000456470 KCTD17-003 protein_coding Homo_sapiens 0 204
ENST00000462640 KCTD17-006 retained_intron Homo_sapiens 6.02558e-44 182
ENST00000478231 KCTD17-008 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000483389 KCTD17-005 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000564195 KCTD5-004 protein_coding Homo_sapiens 0 496
ENST00000564246 KCTD5-003 processed_transcript Homo_sapiens 0 651
ENST00000570005 KCTD5-002 processed_transcript Homo_sapiens 0 508
ENST00000610767 KCTD17-201 protein_coding Homo_sapiens 0 246

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