C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gasdermin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017348 Gsdma-001 ENSMUSG00000017204 10090 + 11:98664351-98677708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017348 0.018±0.01 0.032±0.00 0.334±0.02 0.020±0.01 0.164±0.10 0.565±0.08 0.033±0.00 0.017±0.01 0.008±0.00 6.313±0.73 0.045±0.03 0.042±0.03 0.012±0.00 1.225±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PR CIL_0002PR_0002 CGP 11:98664351-98695979

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0006915 ISS apoptotic process
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301659 GSDMA-001 protein_coding Homo_sapiens 0 1465
ENST00000577447 GSDMA-002 protein_coding Homo_sapiens 0 549

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