C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167914-ENSG00000108344 CGP 9606 17:39962973-39997960
GeneTranscriptPositionBiotype
ENSG00000108344 (PSMD3)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 		ENST00000264639 (PSMD3-001) 39980797-39997960 protein_coding
ENST00000415039 (PSMD3-003) 39980836-39997611 nonsense_mediated_decay
ENST00000485835 (PSMD3-002) 39992998-39996120 retained_intron
ENST00000540504 (PSMD3-005) 39986609-39997955 protein_coding
ENST00000580980 (PSMD3-004) 39986684-39990152 retained_intron
ENSG00000167914 (GSDMA)
gasdermin A 		ENST00000301659 (GSDMA-001) 39962973-39977766 protein_coding
ENST00000577447 (GSDMA-002) 39965523-39970565 protein_coding
CIL_0002PR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017204-ENSMUSG00000017221 CGP 10090 11:98664351-98695979
GeneTranscriptPositionBiotype
ENSMUSG00000017204 (Gsdma)
gasdermin A 		ENSMUST00000017348 (Gsdma-001) 98664351-98677708 protein_coding
ENSMUSG00000017221 (Psmd3)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 		ENSMUST00000017365 (Psmd3-001) 98682554-98695979 protein_coding
ENSMUST00000123676 (Psmd3-004) 98687787-98693840 protein_coding
ENSMUST00000142790 (Psmd3-006) 98690461-98691469 retained_intron
ENSMUST00000149489 (Psmd3-002) 98682565-98692517 retained_intron
ENSMUST00000152102 (Psmd3-005) 98682591-98695049 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PR_0001ENSG00000108344ENST00000264639ENST00000415039ENST00000485835ENST00000540504ENST00000580980ENSG00000167914ENST00000301659ENST00000577447CIL_0002PR_0002ENSMUSG00000017204ENSMUST00000017348ENSMUSG00000017221ENSMUST00000017365ENSMUST00000123676ENSMUST00000142790ENSMUST00000149489ENSMUST00000152102
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PR_0001ENSG00000108344ENST00000264639ENST00000415039ENST00000485835ENSG00000167914ENST00000301659ENST00000577447CIL_0002PR_0002ENSMUSG00000017204ENSMUST00000017348ENSMUSG00000017221ENSMUST00000017365ENSMUST00000123676ENSMUST00000149489
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108344 ENST00000264639 48.526±0.00 49.725±0.00 0.454±0.00 26.642±17.76 25.896±21.34 18.590±12.90 20.442±16.60 22.350±18.51 24.322±20.26 22.417±20.00 89.537±74.55 55.871±28.88 62.906±9.79 49.602±7.61
ENST00000415039 N/A N/A 1.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485835 N/A N/A 0.529±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167914 ENST00000301659 N/A 0.481±0.00 N/A N/A 0.258±0.00 0.099±0.00 0.079±0.00 N/A 0.097±0.00 N/A N/A 0.453±0.19 0.230±0.00 0.140±0.00
ENST00000577447 N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A 0.686±0.00 N/A 0.086±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017204 ENSMUST00000017348 0.018±0.01 0.032±0.00 0.334±0.02 0.020±0.01 0.164±0.10 0.565±0.08 0.033±0.00 0.017±0.01 0.008±0.00 6.313±0.73 0.045±0.03 0.042±0.03 0.012±0.00 1.225±0.10
ENSMUSG00000017221 ENSMUST00000017365 74.753±17.75 78.602±7.55 52.653±6.29 68.280±17.89 68.857±20.51 65.930±4.69 51.134±9.28 122.448±15.69 66.847±11.71 65.417±1.77 51.100±1.07 96.201±21.38 75.248±25.40 30.191±9.80
ENSMUST00000123676 N/A N/A N/A N/A 34.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149489 N/A N/A N/A N/A 3.672±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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