C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pipecolic acid oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017597 Pipox-001 ENSMUSG00000017453 10090 - 11:77880615-77894096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017597
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017597 0.076±0.04 2.431±0.53 0.121±0.00 2.006±1.53 0.270±0.09 0.387±0.12 0.153±0.04 110.056±10.11 65.495±44.04 0.443±0.06 0.036±0.02 1.037±0.37 0.217±0.14 0.114±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076L CIL_00076L_0003 CGP 11:77880615-77979048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005777 IDA peroxisome
GO:0008115 ISS sarcosine oxidase activity
GO:0033514 ISS L-lysine catabolic process to acetyl-CoA via L-pipecolate
GO:0046653 IEA tetrahydrofolate metabolic process
GO:0050031 ISS L-pipecolate oxidase activity
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323372 PIPOX-001 protein_coding Homo_sapiens 0 1212
ENST00000419875 PIPOX-006 processed_transcript Homo_sapiens 0 322
ENST00000466889 PIPOX-015 protein_coding Homo_sapiens 0 438
ENST00000469082 PIPOX-002 protein_coding Homo_sapiens 0 575
ENST00000484308 PIPOX-014 processed_transcript Homo_sapiens 0 675
ENST00000577182 PIPOX-003 processed_transcript Homo_sapiens 0 285
ENST00000580241 PIPOX-011 processed_transcript Homo_sapiens 0 874
ENST00000580383 PIPOX-012 processed_transcript Homo_sapiens 0 302
ENST00000583215 PIPOX-013 processed_transcript Homo_sapiens 0 874

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