C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrix metallopeptidase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017881 Mmp9-001 ENSMUSG00000017737 10090 + 2:164948219-164955850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017881 4.350±1.61 1.192±0.45 4.361±0.60 5.120±3.48 5.402±2.37 1.747±0.21 1.147±0.31 0.713±0.14 2.444±4.49 4.027±0.64 0.184±0.11 1.682±0.57 2.453±3.01 0.171±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BJ CIL_0007BJ_0002 CGP 2:164891882-164955850
CIL_0006GI CIL_0006GI_0002 CGP 2:164940780-164999727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IGI skeletal system development
GO:0001503 IEA ossification
GO:0004222 IDA:ISS metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 ISS extracellular space
GO:0006508 ISS proteolysis
GO:0007566 IDA embryo implantation
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0030198 IGI extracellular matrix organization
GO:0030574 IDA collagen catabolic process
GO:0035987 IEA endodermal cell differentiation
GO:0042802 IEA identical protein binding
GO:0043065 IMP positive regulation of apoptotic process
GO:0050900 IEA leukocyte migration
GO:0051549 IEA positive regulation of keratinocyte migration
GO:0070062 IEA extracellular vesicular exosome
GO:1900122 IEA positive regulation of receptor binding
GO:2001258 IEA negative regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372330 MMP9-001 protein_coding Homo_sapiens 0 1122

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