C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018430 Psmb6-001 ENSMUSG00000018286 10090 + 11:70525386-70527649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018430
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018430 160.612±19.70 141.368±11.90 133.868±21.23 142.261±74.96 136.945±26.65 118.267±15.48 127.361±7.63 166.948±7.61 161.941±30.75 121.395±5.34 149.330±6.54 190.279±43.97 134.720±60.72 157.036±62.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CM CIL_0003CM_0002 CGP 11:70519196-70527858
CIL_0001RF CIL_0001RF_0002 CGP 11:70525367-70558110

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005839 IDA proteasome core complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270586 PSMB6-001 protein_coding Homo_sapiens 0 891
ENST00000571309 PSMB6-003 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000575643 PSMB6-004 retained_intron Homo_sapiens 0 387
ENST00000614486 PSMB6-201 protein_coding Homo_sapiens 0 798

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