C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: malate dehydrogenase 2, NAD (mitochondrial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019323 Mdh2-001 ENSMUSG00000019179 10090 + 5:135778480-135790391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019323
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019323 106.322±74.84 360.502±47.09 110.411±5.37 94.867±46.22 239.919±116.82 164.793±109.56 336.392±34.14 121.616±32.55 92.467±46.07 102.965±45.08 331.630±130.07 194.732±99.72 127.537±71.14 27.333±12.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NU CIL_0006NU_0002 CGP 5:135747220-135790398
CIL_0006NT CIL_0006NT_0002 CGP 5:135778480-135874772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005759 IEA mitochondrial matrix
GO:0005886 IEA plasma membrane
GO:0006099 IEA tricarboxylic acid cycle
GO:0006107 IEA oxaloacetate metabolic process
GO:0006108 ISA malate metabolic process
GO:0006475 ISS internal protein amino acid acetylation
GO:0006734 IEA NADH metabolic process
GO:0016615 ISA malate dehydrogenase activity
GO:0030060 IDA L-malate dehydrogenase activity
GO:0043621 IEA protein self-association
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0046554 IEA malate dehydrogenase (NADP+) activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315758 MDH2-001 protein_coding Homo_sapiens 0 1088
ENST00000424167 MDH2-007 retained_intron Homo_sapiens 0 488
ENST00000443006 MDH2-004 protein_coding Homo_sapiens 0 791

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