C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor-interacting serine-threonine kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019386 Ripk4-001 ENSMUSG00000005251 10090 - 16:97741933-97763737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019386 1.437±1.41 0.150±0.06 21.606±3.81 0.339±0.07 5.486±0.95 13.648±0.63 0.202±0.12 6.057±0.48 1.545±0.28 8.954±0.65 0.030±0.01 3.009±1.03 8.771±2.70 0.683±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036K CIL_00036K_0002 CGP 16:97564684-97763737
CIL_0001VK CIL_0001VK_0002 CGP 16:97741933-97851850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002009 IEA morphogenesis of an epithelium
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0016020 IEA membrane
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303941 ANKK1-001 protein_coding Homo_sapiens 0.00005 55
ENST00000332512 RIPK4-001 protein_coding Homo_sapiens 0 2394
ENST00000352483 RIPK4-201 protein_coding Homo_sapiens 0 963

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