C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor-interacting serine-threonine kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332512 RIPK4-001 ENSG00000183421 9606 - 21:41739369-41767106 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000332512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000332512 0.066±0.00 0.011±0.00 1.458±0.00 0.039±0.01 1.215±0.47 0.652±0.35 0.031±0.01 4.287±2.86 2.655±2.12 2.772±1.73 2.928±2.25 3.321±0.99 2.083±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036K CIL_00036K_0001 CGP 21:41464551-41767106
CIL_0001VK CIL_0001VK_0001 CGP 21:41739369-41879482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002009 IMP morphogenesis of an epithelium
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019386 Ripk4-001 protein_coding Mus_musculus 0 2394
ENSMUST00000113743 Ripk4-002 protein_coding Mus_musculus 0 2148
ENSDART00000128181 ripk4-202 protein_coding Danio_rerio 0 438
ENSDART00000063434 ripk4-201 protein_coding Danio_rerio 0 438
ENSDART00000131291 ripk4-001 protein_coding Danio_rerio 0 305

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