C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019503 Gdpd2-001 ENSMUSG00000019359 10090 + X:100729942-100738894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000019503
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000019503 0.184±0.00 0.287±0.00 2.691±1.88 0.378±0.03 0.710±0.01 0.322±0.19 0.089±0.02 1.098±0.25 5.403±3.37 0.191±0.18 0.185±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009H CIL_00009H_0002 CGP X:100625737-100738895
CIL_00009K CIL_00009K_0002 CGP X:100729873-100818410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0047394 IEA glycerophosphoinositol inositolphosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374382 GDPD2-001 protein_coding Homo_sapiens 0 1958
ENST00000453994 GDPD2-201 protein_coding Homo_sapiens 0 1668
ENST00000472623 GDPD2-002 processed_transcript Homo_sapiens 0 684
ENST00000536730 GDPD2-202 protein_coding Homo_sapiens 0 1705
ENST00000538649 GDPD2-203 protein_coding Homo_sapiens 0 1533

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