C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tissue inhibitor of metalloproteinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020234 Timp3-001 ENSMUSG00000020044 10090 + 10:86300372-86349506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020234 64.773±11.62 83.543±8.62 88.639±0.50 7.705±1.77 45.590±5.97 22.088±3.21 36.675±4.28 279.835±42.06 3.497±0.48 131.907±16.75 23.821±3.36 56.259±18.53 16.109±16.67 5.582±1.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RH CIL_0007RH_0002 VISTA 10:85994227-86597417
CIL_0002NM CIL_0002NM_0002 CGP 10:86021972-86498896
CIL_000337 CIL_000337_0002 CGP 10:86055125-86498896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005604 IDA basement membrane
GO:0005634 IEA nucleus
GO:0008191 IEA metalloendopeptidase inhibitor activity
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0031012 IEA extracellular matrix
GO:0046872 IEA metal ion binding
GO:0051045 IEA negative regulation of membrane protein ectodomain proteolysis
GO:0070062 IEA extracellular vesicular exosome
GO:0071310 IDA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266085 TIMP3-001 protein_coding Homo_sapiens 0 1698

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