C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jade family PHD finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020655 Jade2-001 ENSMUSG00000020387 10090 - 11:51813455-51857653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020655 2.193±0.56 2.960±0.84 2.381±0.04 0.961±0.91 6.385±3.97 2.957±0.99 0.466±0.07 2.433±0.42 0.541±0.38 9.963±4.17 0.310±0.09 4.692±2.38 0.145±0.02 0.398±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 IEA histone acetyltransferase complex
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0043966 ISS histone H3 acetylation
GO:0043981 ISS histone H4-K5 acetylation
GO:0043982 ISS histone H4-K8 acetylation
GO:0043983 ISS histone H4-K12 acetylation
GO:0060395 IDA SMAD protein signal transduction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282605 JADE2-003 protein_coding Homo_sapiens 0 2957
ENST00000361895 JADE2-001 protein_coding Homo_sapiens 0 2425
ENST00000395003 JADE2-002 protein_coding Homo_sapiens 0 1995
ENST00000402835 JADE2-007 protein_coding Homo_sapiens 0 2093
ENST00000413543 JADE1-001 protein_coding Homo_sapiens 1e-22 113
ENST00000430087 JADE2-006 nonsense_mediated_decay Homo_sapiens 0 856
ENST00000431355 JADE2-008 protein_coding Homo_sapiens 0 985
ENST00000453515 JADE2-009 processed_transcript Homo_sapiens 0 531
ENST00000470876 JADE2-004 retained_intron Homo_sapiens 0 878
ENST00000511647 JADE1-002 protein_coding Homo_sapiens 1e-22 113
ENST00000512386 JADE2-011 protein_coding Homo_sapiens 0 555
ENST00000515554 JADE2-010 processed_transcript Homo_sapiens 0 527
ENST00000612830 JADE2-201 protein_coding Homo_sapiens 0 856

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