C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uridine phosphorylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020677 Upp1-001 ENSMUSG00000020407 10090 + 11:9118103-9136164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000020677
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000020677 0.747±0.12 1.370±0.58 0.321±0.06 0.117±0.00 0.888±0.07 0.468±0.15 1.947±0.00 0.245±0.07 2.549±0.24 0.098±0.00 0.845±0.31 0.255±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0002 CGP 11:9048594-9136170
CIL_0000S4 CIL_0000S4_0002 CGP 11:9118103-9684259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004850 IDA uridine phosphorylase activity
GO:0005737 IEA cytoplasm
GO:0006220 IMP pyrimidine nucleotide metabolic process
GO:0009166 IEA nucleotide catabolic process
GO:0042149 IEA cellular response to glucose starvation
GO:0044206 IEA UMP salvage
GO:0046108 IMP uridine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331803 UPP1-001 protein_coding Homo_sapiens 0 817
ENST00000395560 UPP1-004 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000395564 UPP1-003 protein_coding Homo_sapiens 0 817
ENST00000417464 UPP1-006 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000444999 UPP1-012 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000457596 UPP1-010 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000482015 UPP1-005 processed_transcript Homo_sapiens 0 424
ENST00000495446 UPP1-008 retained_intron Homo_sapiens 0 424

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