C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial translational initiation factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020749 Mtif2-002 ENSMUSG00000020459 10090 + 11:29526448-29545279 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020749 2.530±0.10 0.795±0.00 3.916±0.36 3.064±0.17 1.252±0.48 1.677±0.30 1.346±0.03 1.569±0.41 3.700±1.59 1.423±0.00 1.377±0.78 5.658±3.38 3.975±1.96 1.192±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001732 ISS formation of cytoplasmic translation initiation complex
GO:0003743 IEA translation initiation factor activity
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005739 IDA:IC mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006446 ISS regulation of translational initiation
GO:0008135 ISS translation factor activity, nucleic acid binding
GO:0008150 ND biological_process
GO:0032790 ISS ribosome disassembly
GO:0043024 ISS ribosomal small subunit binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245448 ATP5S-002 protein_coding Homo_sapiens 0.0000002 62
ENST00000263629 MTIF2-001 protein_coding Homo_sapiens 0 2316
ENST00000311459 ATP5S-003 protein_coding Homo_sapiens 0.000001 62
ENST00000394600 MTIF2-201 protein_coding Homo_sapiens 0 2313
ENST00000403721 MTIF2-002 protein_coding Homo_sapiens 0 2316
ENST00000417741 MTIF2-006 processed_transcript Homo_sapiens 0 431
ENST00000418823 MTIF2-010 protein_coding Homo_sapiens 0 431
ENST00000425455 RP11-344P13.3-001 processed_pseudogene Homo_sapiens 0 1336
ENST00000554204 ATP5S-001 nonsense_mediated_decay Homo_sapiens 0.0000002 62
ENST00000554438 ATP5S-010 processed_transcript Homo_sapiens 0.0000002 62

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