C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial translational initiation factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394600 MTIF2-201 ENSG00000085760 9606 - 2:55236621-55263868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394600
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394600 1.293±0.16 1.997±0.02 3.109±0.72 2.923±0.00 3.021±1.06 4.979±0.00 2.012±0.00 2.120±1.74 2.153±0.98 0.904±0.00 1.940±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z4 CIL_0000Z4_0002 CGP 2:55231903-55269347
CIL_0000Z6 CIL_0000Z6_0002 CGP 2:55236595-55419921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001732 ISS formation of cytoplasmic translation initiation complex
GO:0003743 IEA translation initiation factor activity
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0006446 ISS regulation of translational initiation
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008135 ISS translation factor activity, nucleic acid binding
GO:0032790 ISS ribosome disassembly
GO:0043024 ISS ribosomal small subunit binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093239 Mtif2-201 protein_coding Mus_musculus 0 2318
ENSMUST00000020749 Mtif2-002 protein_coding Mus_musculus 0 2313
ENSMUST00000144321 Mtif2-003 protein_coding Mus_musculus 0 1317
ENSMUST00000132783 Mtif2-006 protein_coding Mus_musculus 0 610
ENSMUST00000136351 Mtif2-005 protein_coding Mus_musculus 0 540
ENSMUST00000133452 Mtif2-004 protein_coding Mus_musculus 0 433
ENSMUST00000129893 Mtif2-001 processed_transcript Mus_musculus 0 270

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