C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-Coenzyme A carboxylase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020843 Acaca-201 ENSMUSG00000020532 10090 + 11:84195438-84401645 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020843 120.182±39.53 56.883±25.01 6.088±0.49 10.220±3.50 158.072±23.54 3.682±1.73 3.163±1.26 12.394±4.26 6.013±3.49 14.199±1.82 1.009±0.42 14.142±5.39 3.889±2.15 4.076±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0002 VISTA 11:84076005-84677109
CIL_0008DP CIL_0008DP_0002 VISTA 11:84095730-84696774
CIL_0005SZ CIL_0005SZ_0002 CGP 11:84129672-84401651

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001894 IMP tissue homeostasis
GO:0003989 IMP:IDA acetyl-CoA carboxylase activity
GO:0004075 IEA biotin carboxylase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006084 IDA acetyl-CoA metabolic process
GO:0006629 IMP lipid metabolic process
GO:0006633 IDA fatty acid biosynthetic process
GO:0044268 IMP multicellular organismal protein metabolic process
GO:0046872 IEA metal ion binding
GO:0051289 IDA protein homotetramerization
GO:0055088 IMP lipid homeostasis
GO:2001295 IEA malonyl-CoA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000083079 acaca-201 protein_coding Danio_rerio 0 3718
ENSDART00000146773 acaca-001 protein_coding Danio_rerio 0 2187
ENST00000611803 ACACA-201 protein_coding Homo_sapiens 0 9489
ENST00000612120 ACACA-021 processed_transcript Homo_sapiens 0 508
ENST00000612895 ACACA-002 protein_coding Homo_sapiens 0 9489
ENST00000613146 ACACA-011 retained_intron Homo_sapiens 0 4865
ENST00000613687 ACACA-202 protein_coding Homo_sapiens 0 9775
ENST00000613776 ACACA-014 retained_intron Homo_sapiens 0 1576
ENST00000614428 ACACA-009 protein_coding Homo_sapiens 0 9775
ENST00000614450 ACACA-022 processed_transcript Homo_sapiens 0 756
ENST00000614482 ACACA-013 nonsense_mediated_decay Homo_sapiens 0 2333
ENST00000614789 ACACA-008 protein_coding Homo_sapiens 0 206
ENST00000615229 ACACA-010 nonsense_mediated_decay Homo_sapiens 0 931
ENST00000615918 ACACA-203 protein_coding Homo_sapiens 0 206
ENST00000616317 ACACA-001 protein_coding Homo_sapiens 0 9775
ENST00000616352 ACACA-004 protein_coding Homo_sapiens 0 490
ENST00000617548 ACACA-005 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000617649 ACACA-003 protein_coding Homo_sapiens 0 9489
ENST00000618053 ACACA-025 protein_coding Homo_sapiens 1e-29 134
ENST00000618575 ACACA-024 retained_intron Homo_sapiens 0 789
ENST00000619245 ACACA-023 retained_intron Homo_sapiens 0 872
ENST00000619487 ACACA-204 protein_coding Homo_sapiens 0 9775
ENST00000619546 ACACA-012 protein_coding Homo_sapiens 0 2944
ENST00000621312 ACACA-205 protein_coding Homo_sapiens 0 9489
ENST00000621960 ACACA-018 protein_coding Homo_sapiens 0 625

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