C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-CoA carboxylase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619546 ACACA-012 ENSG00000278540 9606 - 17:37084998-37205812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverOvaryPlacentaENST00000619546
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Ovary Placenta
ENST00000619546 1.379±0.00 1.095±0.00 3.683±0.00 6.179±0.00 1.875±0.30 0.780±0.00 1.465±0.36 2.149±0.00 1.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Q CIL_00085Q_0001 VISTA 17:36672050-37272645
CIL_00085M CIL_00085M_0001 VISTA 17:36678794-37279927
CIL_0008DP CIL_0008DP_0001 VISTA 17:36790335-37391543
CIL_0008GS CIL_0008GS_0001 VISTA 17:36817120-37418221
CIL_0005HT CIL_0005HT_0002 CGP 17:36948875-37406818
CIL_0007ND CIL_0007ND_0067 UCNEbase 17:37080074-37115189
CIL_0005SZ CIL_0005SZ_0001 CGP 17:37084988-37406818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003989 IEA acetyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0006633 IEA fatty acid biosynthetic process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020843 Acaca-201 protein_coding Mus_musculus 0 2944
ENSMUST00000103201 Acaca-001 protein_coding Mus_musculus 0 2944
ENSDART00000089078 acacb-201 protein_coding Danio_rerio 0 765
ENSDART00000148130 acacb-001 protein_coding Danio_rerio 0 765
ENSMUST00000031583 Acacb-201 protein_coding Mus_musculus 0 455
ENSMUST00000143276 Acacb-003 processed_transcript Mus_musculus 0 455
ENSMUST00000102582 Acacb-001 protein_coding Mus_musculus 0 455
ENSMUST00000183887 Acaca-008 protein_coding Mus_musculus 0 448

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