C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-CoA carboxylase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616317 ACACA-001 ENSG00000278540 9606 - 17:37084988-37406780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryPlacentaENST00000616317
Transcript ID Brain Colon Kidney Ovary Placenta
ENST00000616317 1.911±0.37 0.935±0.00 0.815±0.00 1.076±0.00 0.379±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Q CIL_00085Q_0001 VISTA 17:36672050-37272645
CIL_00085M CIL_00085M_0001 VISTA 17:36678794-37279927
CIL_0008DP CIL_0008DP_0001 VISTA 17:36790335-37391543
CIL_0008GS CIL_0008GS_0001 VISTA 17:36817120-37418221
CIL_0005HT CIL_0005HT_0002 CGP 17:36948875-37406818
CIL_0007ND CIL_0007ND_0067 UCNEbase 17:37080074-37115189
CIL_0005SZ CIL_0005SZ_0001 CGP 17:37084988-37406818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001894 IEA tissue homeostasis
GO:0003824 IEA catalytic activity
GO:0003989 ISS:IEA acetyl-CoA carboxylase activity
GO:0004075 IEA biotin carboxylase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0005829 ISS cytosol
GO:0006084 ISS acetyl-CoA metabolic process
GO:0006112 TAS energy reserve metabolic process
GO:0006629 IEA lipid metabolic process
GO:0006633 ISS:IEA fatty acid biosynthetic process
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006768 TAS biotin metabolic process
GO:0006853 TAS carnitine shuttle
GO:0008152 IEA metabolic process
GO:0008716 IEA D-alanine-D-alanine ligase activity
GO:0016874 IEA ligase activity
GO:0019432 TAS triglyceride biosynthetic process
GO:0031325 TAS positive regulation of cellular metabolic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044268 IEA multicellular organismal protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0051289 ISS protein homotetramerization
GO:0055088 IEA lipid homeostasis
GO:0070062 IDA extracellular vesicular exosome
GO:2001295 IEA malonyl-CoA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103201 Acaca-001 protein_coding Mus_musculus 0 9830
ENSMUST00000020843 Acaca-201 protein_coding Mus_musculus 0 9775
ENSMUST00000183548 Acaca-007 retained_intron Mus_musculus 0 1410
ENSMUST00000130012 Acaca-004 protein_coding Mus_musculus 0 1308
ENSMUST00000031583 Acacb-201 protein_coding Mus_musculus 0 861
ENSMUST00000143276 Acacb-003 processed_transcript Mus_musculus 0 861
ENSMUST00000102582 Acacb-001 protein_coding Mus_musculus 0 861
ENSMUST00000183887 Acaca-008 protein_coding Mus_musculus 0 848
ENSDART00000089078 acacb-201 protein_coding Danio_rerio 0 793
ENSDART00000148130 acacb-001 protein_coding Danio_rerio 0 793
ENSMUST00000133811 Acaca-005 protein_coding Mus_musculus 0 689
ENSMUST00000137500 Acaca-003 protein_coding Mus_musculus 0 394

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