C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonucleotide reductase M2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020980 Rrm2-001 ENSMUSG00000020649 10090 + 12:24708241-24714146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020980 1.714±1.20 1.262±0.09 1.792±0.13 10.946±8.37 1.791±1.46 3.417±1.51 0.575±0.08 0.759±0.25 55.657±63.80 0.724±0.26 0.311±0.10 3.452±1.83 32.861±22.39 2.846±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DI CIL_0007DI_0002 CGP 12:24665838-24714146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004748 IDA ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IEA DNA replication
GO:0009186 IEA deoxyribonucleoside diphosphate metabolic process
GO:0009262 IDA deoxyribonucleotide metabolic process
GO:0009263 IDA deoxyribonucleotide biosynthetic process
GO:0046872 IEA metal ion binding
GO:0051259 IPI protein oligomerization
GO:0051290 IPI protein heterotetramerization
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112155 rrm2-201 protein_coding Danio_rerio 0 671
ENST00000304567 RRM2-013 protein_coding Homo_sapiens 0 1408
ENST00000360566 RRM2-001 protein_coding Homo_sapiens 0 1408
ENST00000426279 RRM2P3-001 processed_pseudogene Homo_sapiens 0 1199
ENST00000436212 RRM2P2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000459969 RRM2-005 retained_intron Homo_sapiens 0 451
ENST00000461327 RRM2-003 retained_intron Homo_sapiens 0 359
ENST00000462343 RRM2-012 retained_intron Homo_sapiens 0 302
ENST00000474701 RRM2-010 protein_coding Homo_sapiens 0 1061
ENST00000485717 RRM2-011 retained_intron Homo_sapiens 0 641
ENST00000487591 RRM2-006 retained_intron Homo_sapiens 0 300
ENST00000491447 RRM2-009 retained_intron Homo_sapiens 0 649
ENST00000498343 RRM2-004 retained_intron Homo_sapiens 0 300
ENST00000615152 RRM2-201 protein_coding Homo_sapiens 0 1408

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