C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205795-ENSG00000171848 CGP 9606 2:10056780-10131419
GeneTranscriptPositionBiotype
ENSG00000171848 (RRM2)
ribonucleotide reductase M2 		ENST00000304567 (RRM2-013) 10122730-10131418 protein_coding
ENST00000360566 (RRM2-001) 10122328-10131418 protein_coding
ENST00000459969 (RRM2-005) 10122712-10124117 retained_intron
ENST00000461327 (RRM2-003) 10122739-10123852 retained_intron
ENST00000462343 (RRM2-012) 10126791-10127361 retained_intron
ENST00000474701 (RRM2-010) 10123171-10129155 protein_coding
ENST00000485717 (RRM2-011) 10126830-10129313 retained_intron
ENST00000487591 (RRM2-006) 10126512-10127220 retained_intron
ENST00000491447 (RRM2-009) 10122752-10124878 retained_intron
ENST00000498343 (RRM2-004) 10122739-10123712 retained_intron
ENST00000615152 (RRM2-201) 10122568-10131419 protein_coding
ENSG00000205795 (CYS1)
cystin 1 		ENST00000381813 (CYS1-001) 10056780-10080411 protein_coding
ENST00000477304 (CYS1-002) 10058614-10080944 processed_transcript
ENSG00000272524 (RP11-254F7.4)
 ENST00000607140 (RP11-254F7.4-001) 10120734-10121065 lincRNA
CIL_0007DI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062563-ENSMUSG00000020649 CGP 10090 12:24665838-24714146
GeneTranscriptPositionBiotype
ENSMUSG00000020649 (Rrm2)
ribonucleotide reductase M2 		ENSMUST00000020980 (Rrm2-001) 24708241-24714146 protein_coding
ENSMUST00000147789 (Rrm2-002) 24708556-24709589 retained_intron
ENSMUST00000153058 (Rrm2-003) 24708752-24711769 protein_coding
ENSMUST00000154588 (Rrm2-004) 24709029-24713341 protein_coding
ENSMUSG00000062563 (Cys1)
cystin 1 		ENSMUST00000074163 (Cys1-001) 24665838-24681813 nonsense_mediated_decay
ENSMUST00000148477 (Cys1-002) 24666554-24679947 processed_transcript
ENSMUST00000156453 (Cys1-003) 24666698-24680908 protein_coding
ENSMUST00000163514 (Cys1-005) 24665953-24681023 nonsense_mediated_decay
ENSMUST00000172771 (Cys1-006) 24668453-24680719 protein_coding
ENSMUST00000173145 (Cys1-004) 24665953-24681023 nonsense_mediated_decay
ENSMUST00000186602 (Cys1-201) 24665848-24681795 protein_coding
ENSMUST00000189849 (Cys1-202) 24665848-24681795 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DI_0001ENSG00000171848ENST00000304567ENST00000360566ENST00000459969ENST00000461327ENST00000462343ENST00000474701ENST00000485717ENST00000487591ENST00000491447ENST00000498343ENST00000615152ENSG00000205795ENST00000381813ENST00000477304ENSG00000272524ENST00000607140CIL_0007DI_0002ENSMUSG00000020649ENSMUST00000020980ENSMUST00000147789ENSMUST00000153058ENSMUST00000154588ENSMUSG00000062563ENSMUST00000074163ENSMUST00000148477ENSMUST00000156453ENSMUST00000163514ENSMUST00000172771ENSMUST00000173145ENSMUST00000186602ENSMUST00000189849
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DI_0001ENSG00000171848ENST00000304567ENST00000360566ENST00000459969ENST00000461327ENST00000474701ENST00000485717ENST00000615152ENSG00000205795ENST00000381813ENSG00000272524ENST00000607140CIL_0007DI_0002ENSMUSG00000020649ENSMUST00000020980ENSMUST00000153058ENSMUST00000154588ENSMUSG00000062563ENSMUST00000074163ENSMUST00000148477ENSMUST00000156453ENSMUST00000163514ENSMUST00000172771ENSMUST00000173145ENSMUST00000186602ENSMUST00000189849
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171848 ENST00000304567 1.027±0.00 0.777±0.00 0.154±0.00 0.123±0.00 0.273±0.00 2.109±1.52 0.450±0.00 0.162±0.00 0.089±0.00 0.410±0.00 0.056±0.03 3.589±2.78 3.724±0.65 2.365±0.77
ENST00000360566 N/A N/A N/A N/A 0.267±0.00 N/A N/A N/A 0.215±0.00 0.247±0.00 N/A N/A N/A N/A
ENST00000459969 N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461327 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.445±0.00 N/A N/A N/A N/A
ENST00000462343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474701 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000485717 N/A N/A 0.485±0.00 0.174±0.00 4.476±0.00 N/A N/A N/A N/A 0.867±0.34 N/A 19.856±7.48 10.095±0.00 3.579±0.00
ENST00000487591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615152 N/A N/A N/A N/A N/A N/A N/A 0.341±0.00 N/A N/A N/A 0.221±0.00 N/A N/A
ENSG00000205795 ENST00000381813 0.540±0.00 N/A 3.808±0.00 1.026±0.00 1.091±0.95 0.703±0.50 0.621±0.41 71.205±0.00 0.386±0.00 3.587±0.00 0.077±0.00 3.993±3.88 0.141±0.02 1.572±1.08
ENST00000477304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272524 ENST00000607140 0.085±0.00 N/A N/A 0.043±0.00 0.040±0.00 N/A N/A 0.127±0.00 0.294±0.00 N/A N/A 0.300±0.00 N/A 0.197±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020649 ENSMUST00000020980 1.714±1.20 1.262±0.09 1.792±0.13 10.946±8.37 1.791±1.46 3.417±1.51 0.575±0.08 0.759±0.25 55.657±63.80 0.724±0.26 0.311±0.10 3.452±1.83 32.861±22.39 2.846±0.99
ENSMUST00000147789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153058 N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A N/A N/A 4.627±0.00 28.280±0.00 1.213±0.00
ENSMUST00000154588 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 0.162±0.03 6.250±0.00 29.666±25.93 2.310±0.00
ENSMUSG00000062563 ENSMUST00000074163 N/A 0.355±0.02 4.890±0.09 0.588±0.00 0.184±0.00 0.449±0.14 N/A 6.960±2.55 0.437±0.22 1.568±0.32 0.414±0.00 0.561±0.02 0.308±0.28 0.022±0.00
ENSMUST00000148477 0.744±0.00 N/A N/A 1.141±0.00 0.693±0.15 N/A 1.362±0.00 N/A 0.999±0.00 2.608±0.00 N/A 1.797±0.27 0.609±0.38 0.271±0.06
ENSMUST00000156453 0.577±0.00 1.272±0.23 N/A N/A 0.742±0.00 1.251±0.34 N/A N/A N/A 3.094±0.01 N/A 1.364±0.53 N/A N/A
ENSMUST00000163514 0.666±0.19 1.511±0.88 N/A 0.254±0.00 0.887±0.35 1.667±0.54 1.280±0.00 N/A N/A 2.599±0.26 N/A 1.570±0.51 N/A N/A
ENSMUST00000172771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A
ENSMUST00000173145 0.841±0.00 N/A N/A N/A N/A 0.785±0.33 N/A N/A N/A N/A N/A 0.959±0.05 N/A N/A
ENSMUST00000186602 0.183±0.00 0.341±0.12 6.598±0.62 0.096±0.00 0.146±0.00 0.338±0.00 0.550±0.00 9.251±2.90 0.634±0.35 1.756±0.31 0.814±0.53 0.924±0.56 1.568±1.65 0.079±0.03
ENSMUST00000189849 0.230±0.00 0.199±0.06 N/A N/A 0.263±0.10 0.538±0.09 N/A 2.481±0.00 N/A 0.842±0.00 0.508±0.03 0.942±0.37 0.671±0.67 0.372±0.00

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