C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonucleotide reductase M2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304567 RRM2-013 ENSG00000171848 9606 + 2:10122730-10131418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304567
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304567 1.027±0.00 0.777±0.00 0.154±0.00 0.123±0.00 0.273±0.00 2.109±1.52 0.450±0.00 0.162±0.00 0.089±0.00 0.410±0.00 0.056±0.03 3.589±2.78 3.724±0.65 2.365±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DI CIL_0007DI_0001 CGP 2:10056780-10131419

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000083 TAS regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004748 ISS ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006260 IEA DNA replication
GO:0009186 IEA deoxyribonucleoside diphosphate metabolic process
GO:0009263 ISS deoxyribonucleotide biosynthetic process
GO:0015949 TAS nucleobase-containing small molecule interconversion
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020980 Rrm2-001 protein_coding Mus_musculus 0 1408
ENSMUST00000120048 Gm11485-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000153058 Rrm2-003 protein_coding Mus_musculus 0 771
ENSMUST00000154588 Rrm2-004 protein_coding Mus_musculus 0 726
ENSMUST00000147789 Rrm2-002 retained_intron Mus_musculus 0 215

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