C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021166 Cygb-001 ENSMUSG00000020810 10090 - 11:116645595-116654313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021166 33.427±4.72 14.501±2.97 39.022±5.78 6.887±2.32 18.198±6.30 9.579±3.33 15.911±0.75 6.365±1.79 1.219±0.60 10.190±0.98 4.678±1.30 32.069±7.91 1.078±0.97 1.751±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CA CIL_0000CA_0002 CGP 11:116598165-116654313
CIL_0000CF CIL_0000CF_0002 CGP 11:116645595-116668389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 ISS peroxidase activity
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005737 IEA cytoplasm
GO:0006979 ISS response to oxidative stress
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293230 CYGB-001 protein_coding Homo_sapiens 0 1279
ENST00000586160 CYGB-004 processed_transcript Homo_sapiens 0 324
ENST00000589145 CYGB-005 protein_coding Homo_sapiens 0 647
ENST00000589342 CYGB-002 protein_coding Homo_sapiens 0 604
ENST00000590175 CYGB-003 protein_coding Homo_sapiens 0 773

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