C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sel-1 suppressor of lin-12-like (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021347 Sel1l-001 ENSMUSG00000020964 10090 - 12:91806043-91849157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021347
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021347 7.084±1.08 13.705±1.40 8.140±0.80 4.073±0.93 3.172±0.64 3.550±0.40 5.082±0.71 7.161±1.61 8.637±2.25 7.153±0.50 8.279±5.12 17.769±3.29 2.527±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0002 VISTA 12:91377577-91981083
CIL_0000TE CIL_0000TE_0002 CGP 12:91638542-91849157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0007219 IEA Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0034976 IMP response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336735 SEL1L-001 protein_coding Homo_sapiens 0 2817
ENST00000554744 SEL1L-007 retained_intron Homo_sapiens 0 678
ENST00000555824 SEL1L-003 protein_coding Homo_sapiens 0 830
ENST00000555923 SEL1L-005 retained_intron Homo_sapiens 0 204
ENST00000557372 SEL1L-004 protein_coding Homo_sapiens 0 198

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